RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PRCPP42785 496 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 SLC11A1P49279 550 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 PLCB3Q01970 1234 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 DSC1Q08554 894 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 ELAVL2Q12926 359 aaKnown RBP15.3■□□□□ 0.04
SSBP3-208ENST00000444533 SNRNP35Q16560 246 aaKnown RBP15.3■□□□□ 0.04
SSBP3-208ENST00000444533 XKR4Q5GH76 650 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 PDE12Q6L8Q7 609 aaKnown RBP15.3■□□□□ 0.04
SSBP3-208ENST00000444533 SMYD4Q8IYR2 804 aaPredicted RBP15.3■□□□□ 0.04
SSBP3-208ENST00000444533 SLC39A11Q8N1S5 342 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 RDH13Q8NBN7 331 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 GSTCDQ8NEC7 633 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 DHTKD1Q96HY7 919 aaPredicted RBP15.3■□□□□ 0.04
SSBP3-208ENST00000444533 IGSF21Q96ID5 467 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 PPP1R10Q96QC0 940 aaKnown RBP15.3■□□□□ 0.04
SSBP3-208ENST00000444533 CDX2Q99626 313 aaPredicted RBP15.3■□□□□ 0.04
SSBP3-208ENST00000444533 IKZF4Q9H2S9 585 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 KCTD10Q9H3F6 313 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 ALG13Q9NP73 1137 aaKnown RBP15.3■□□□□ 0.04
SSBP3-208ENST00000444533 HCSTQ9UBK5 93 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 TRAF3IP3Q9Y228 551 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 SSX2IPQ9Y2D8 614 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 C2CD2Q9Y426 696 aa15.3■□□□□ 0.04
SSBP3-208ENST00000444533 SF3B1O75533 1304 aaKnown RBP eCLIP15.29■□□□□ 0.043e-6■■■■■ 81.8
SSBP3-208ENST00000444533 CETN3O15182 167 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 FAM189A1O60320 539 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 B3GAT3O94766 335 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 ITGB1P05556 798 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 TMEM191BP0C7N4 346 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 CYP3A5P20815 502 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 NR2F2P24468 414 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 PBX3P40426 434 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 LRRC63Q05C16 580 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 MORC3Q14149 939 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 EDRF1Q3B7T1 1238 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 TIGD5Q53EQ6 642 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 ZBTB41Q5SVQ8 909 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 CCDC183Q5T5S1 534 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 JADE1Q6IE81 842 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 KIAA1841Q6NSI8 718 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 DCLRE1AQ6PJP8 1040 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 SLC9A9Q8IVB4 645 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 BRSK2Q8IWQ3 736 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 POF1BQ8WVV4 589 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 MRPL38Q96DV4 380 aaKnown RBP15.29■□□□□ 0.04
SSBP3-208ENST00000444533 ANKRD36BP1Q96IX9 119 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 ENTPD7Q9NQZ7 604 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 TLR9Q9NR96 1032 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 NUB1Q9Y5A7 615 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 TDRD15B5MCY1 1934 aaKnown RBP15.29■□□□□ 0.04
SSBP3-208ENST00000444533 NLRC5Q86WI3 1866 aa15.29■□□□□ 0.04
SSBP3-208ENST00000444533 CITO14578 2027 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 RFXAPO00287 272 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 FGFR1OPO95684 399 aaKnown RBP15.28■□□□□ 0.04
SSBP3-208ENST00000444533 TNNC2P02585 160 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 LINC00271P0C7V0 271 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 KRT13P13646 458 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 PAX3P23760 479 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 TFAMQ00059 246 aaKnown RBP15.28■□□□□ 0.04
SSBP3-208ENST00000444533 ADAM9Q13443 819 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 NFIL3Q16649 462 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 KLHL10Q6JEL2 608 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 SASS6Q6UVJ0 657 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 TMC7Q7Z402 723 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 DDX53Q86TM3 631 aaKnown RBP15.28■□□□□ 0.04
SSBP3-208ENST00000444533 ADSSL1Q8N142 457 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 MICALL1Q8N3F8 863 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 MLKLQ8NB16 471 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 GPT2Q8TD30 523 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 MYLIPQ8WY64 445 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 NGRNQ9NPE2 291 aaKnown RBP15.28■□□□□ 0.04
SSBP3-208ENST00000444533 ADAM28Q9UKQ2 775 aa15.28■□□□□ 0.04
SSBP3-208ENST00000444533 ARHGEF37A1IGU5 675 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 FSD2A1L4K1 749 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 PODXLO00592 558 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 GRM6O15303 877 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 CSPG5O95196 566 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 ADRB2P07550 413 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 DLATP10515 647 aaKnown RBP15.27■□□□□ 0.04
SSBP3-208ENST00000444533 EPB41P11171 864 aaKnown RBP15.27■□□□□ 0.04
SSBP3-208ENST00000444533 TNNI1P19237 187 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 CCNE1P24864 410 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 PSMC2P35998 433 aaKnown RBP15.27■□□□□ 0.04
SSBP3-208ENST00000444533 FKBP3Q00688 224 aaKnown RBP15.27■□□□□ 0.04
SSBP3-208ENST00000444533 SPAG1Q07617 926 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 PAK1Q13153 545 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.04
SSBP3-208ENST00000444533 CRELD2Q6UXH1 353 aaPredicted RBP15.27■□□□□ 0.04
SSBP3-208ENST00000444533 SPRED2Q7Z698 418 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 CBWD2Q8IUF1 395 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 VPS52Q8N1B4 723 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 SPPL3Q8TCT6 385 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 TMEM174Q8WUU8 243 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 FBXL18Q96ME1 805 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 ZMAT2Q96NC0 199 aaKnown RBP15.27■□□□□ 0.04
SSBP3-208ENST00000444533 TCF25Q9BQ70 676 aa15.27■□□□□ 0.04
SSBP3-208ENST00000444533 EPOPA6NHQ4 379 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 URODP06132 367 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 NFICP08651 508 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms