RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 NAB2Q15742 525 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 CCDC85BQ15834 202 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-211ENST00000443563 ENOX2Q16206 610 aaKnown RBP11.78□□□□□ -0.52
HDAC6-211ENST00000443563 GLRA4Q5JXX5 417 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 DCLRE1AQ6PJP8 1040 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 NT5DC4Q86YG4 428 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 NELFCDQ8IXH7 590 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 VPS52Q8N1B4 723 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 GPD1LQ8N335 351 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 GLIS3Q8NEA6 775 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 PPM1EQ8WY54 764 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 KIF12Q96FN5 646 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 CDCA3Q99618 268 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-211ENST00000443563 TCF25Q9BQ70 676 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 UBQLN1Q9UMX0 589 aaKnown RBP11.78□□□□□ -0.52
HDAC6-211ENST00000443563 SF3B1O75533 1304 aaKnown RBP eCLIP11.78□□□□□ -0.521e-6■■■■■ 66.8
HDAC6-211ENST00000443563 ZNF233A6NK53 670 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 LACTBL1A8MY62 500 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 TISP43B9A030 160 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 TMEM189-UBE2V1I3L0A0 370 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 PDXKO00764 312 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 FSCN2O14926 492 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 SOD2P04179 222 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 CTSAP10619 480 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 PAX3P23760 479 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 ERVFC1P60507 584 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 SKIV2LQ15477 1246 aaKnown RBP11.77□□□□□ -0.53
HDAC6-211ENST00000443563 PLPP4Q5VZY2 271 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 TMEM173Q86WV6 379 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-211ENST00000443563 C12orf56Q8IXR9 622 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 GUF1Q8N442 669 aaKnown RBP11.77□□□□□ -0.53
HDAC6-211ENST00000443563 KIAA0895Q8NCT3 520 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 BEST2Q8NFU1 509 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 ZMAT2Q96NC0 199 aaKnown RBP11.77□□□□□ -0.53
HDAC6-211ENST00000443563 HERC2P3Q9BVR0 1158 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 ZBP1Q9H171 429 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 IKZF4Q9H2S9 585 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 PCIF1Q9H4Z3 704 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 AGPAT3Q9NRZ7 376 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 MARCH5Q9NX47 278 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 RBAKQ9NYW8 714 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-211ENST00000443563 HSPBP1Q9NZL4 362 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 COG5Q9UP83 839 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 C2CD2Q9Y426 696 aa11.77□□□□□ -0.53
HDAC6-211ENST00000443563 PRRC2BQ5JSZ5 2229 aaKnown RBP11.76□□□□□ -0.53
HDAC6-211ENST00000443563 TGFB1I1O43294 461 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 CALUO43852 315 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-211ENST00000443563 B3GAT3O94766 335 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 CXCL14O95715 111 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 URODP06132 367 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 CA8P35219 290 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 HOXD13P35453 343 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 IRS1P35568 1242 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 PPP1R2P41236 205 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 CLCNKBP51801 687 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 CREMQ03060 361 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 TMEM132DQ14C87 1099 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 ZBTB6Q15916 424 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 UPP1Q16831 310 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 USP41Q3LFD5 358 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 TCEAL5Q5H9L2 206 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 ZBTB41Q5SVQ8 909 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 ZNF658Q5TYW1 1059 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-211ENST00000443563 KIAA1841Q6NSI8 718 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 FUT10Q6P4F1 479 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 PDXDC1Q6P996 788 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 CRELD2Q6UXH1 353 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-211ENST00000443563 BRSK2Q8IWQ3 736 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 GPR65Q8IYL9 337 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 MRPL43Q8N983 215 aaKnown RBP11.76□□□□□ -0.53
HDAC6-211ENST00000443563 XXYLT1Q8NBI6 393 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 SPATA20Q8TB22 786 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 NOC3LQ8WTT2 800 aaKnown RBP11.76□□□□□ -0.53
HDAC6-211ENST00000443563 CACTINQ8WUQ7 758 aaKnown RBP11.76□□□□□ -0.53
HDAC6-211ENST00000443563 TMEM174Q8WUU8 243 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 BCL7CQ8WUZ0 217 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-211ENST00000443563 SAAL1Q96ER3 474 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 CBWD1Q9BRT8 395 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 EMILIN2Q9BXX0 1053 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 CXCL16Q9H2A7 254 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 TLE6Q9H808 572 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 MRPL17Q9NRX2 175 aaKnown RBP11.76□□□□□ -0.53
HDAC6-211ENST00000443563 IRAK3Q9Y616 596 aa11.76□□□□□ -0.53
HDAC6-211ENST00000443563 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-211ENST00000443563 PODXLO00592 558 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 CLIC2O15247 247 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 MEFVO15553 781 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-211ENST00000443563 CSPG5O95196 566 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 KIF4AO95239 1232 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 SRGAP2BP0DMP2 458 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 LRPAP1P30533 357 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 GLUD2P49448 558 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 SOX4Q06945 474 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-211ENST00000443563 STIM1Q13586 685 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 MYBPC2Q14324 1141 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 COBLL1Q53SF7 1204 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 SPATA1Q5VX52 437 aa11.75□□□□□ -0.53
HDAC6-211ENST00000443563 JADE1Q6IE81 842 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms