RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FAM84AQ96KN4 292 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 FBXL18Q96ME1 805 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 TMEM175Q9BSA9 504 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 C11orf84Q9BUA3 381 aaPredicted RBP17.43■□□□□ 0.38
USP39-205ENST00000442708 VN1R3Q9BXE9 311 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 NUP62CLQ9H1M0 184 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 SPG21Q9NZD8 308 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 TUBGCP4Q9UGJ1 667 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 TRAF3IP3Q9Y228 551 aa17.43■□□□□ 0.38
USP39-205ENST00000442708 PRG3Q9Y2Y8 225 aaPredicted RBP17.43■□□□□ 0.38
USP39-205ENST00000442708 PPP1R3GB7ZBB8 358 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 GUCY2FP51841 1108 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 PMS1P54277 932 aaKnown RBP17.42■□□□□ 0.38
USP39-205ENST00000442708 PPP2R3AQ06190 1150 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 CD300LGQ6UXG3 332 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 HS2ST1Q7LGA3 356 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 BRSK2Q8IWQ3 736 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 EFCAB13Q8IY85 973 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 RDH13Q8NBN7 331 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 KIF12Q96FN5 646 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 IGSF21Q96ID5 467 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 RBAKQ9NYW8 714 aaPredicted RBP17.42■□□□□ 0.38
USP39-205ENST00000442708 CGNQ9P2M7 1197 aaKnown RBP17.42■□□□□ 0.38
USP39-205ENST00000442708 FAN1Q9Y2M0 1017 aa17.42■□□□□ 0.38
USP39-205ENST00000442708 MYO7AQ13402 2215 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 KIAA0391O15091 583 aaKnown RBP17.41■□□□□ 0.38
USP39-205ENST00000442708 CSPG5O95196 566 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 EFEMP2O95967 443 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 LDHAP00338 332 aaKnown RBP17.41■□□□□ 0.38
USP39-205ENST00000442708 NR3C1P04150 777 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 ALDH2P05091 517 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 CASP4P49662 377 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 CLCNKBP51801 687 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 PLCB3Q01970 1234 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 SCARA3Q6AZY7 606 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 CENPPQ6IPU0 288 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 SLC9A9Q8IVB4 645 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 XXYLT1Q8NBI6 393 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 GOLGA5Q8TBA6 731 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 TMEM174Q8WUU8 243 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 POF1BQ8WVV4 589 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
USP39-205ENST00000442708 PDE11AQ9HCR9 933 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 PCDHGC5Q9Y5F6 944 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 MTCH2Q9Y6C9 303 aa17.41■□□□□ 0.38
USP39-205ENST00000442708 PRRC2BQ5JSZ5 2229 aaKnown RBP17.4■□□□□ 0.38
USP39-205ENST00000442708 KIF20AO95235 890 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 KIF4AO95239 1232 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 MBD3O95983 291 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 PPM1AP35813 382 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 ERVFC1P60507 584 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 POU5F1Q01860 360 aaKnown RBP17.4■□□□□ 0.38
USP39-205ENST00000442708 SNRNP35Q16560 246 aaKnown RBP17.4■□□□□ 0.38
USP39-205ENST00000442708 UPP1Q16831 310 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 ANKRD40Q6AI12 368 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 TAS1R1Q7RTX1 841 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 CD302Q8IX05 232 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 C3orf58Q8NDZ4 430 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 PLEKHO2Q8TD55 490 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 HASPINQ8TF76 798 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 ASB7Q9H672 318 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 PTPRJQ12913 1337 aa17.4■□□□□ 0.38
USP39-205ENST00000442708 TRIM49BA6NDI0 452 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 ZNF233A6NK53 670 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 CALUO43852 315 aaPredicted RBP17.39■□□□□ 0.37
USP39-205ENST00000442708 EXOC3O60645 756 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 IL18RAPO95256 599 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 POU3F3P20264 500 aaPredicted RBP17.39■□□□□ 0.37
USP39-205ENST00000442708 IGFBP4P22692 258 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 IRS1P35568 1242 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 CYP24A1Q07973 514 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 HSP90AA2PQ14568 343 aaPredicted RBP17.39■□□□□ 0.37
USP39-205ENST00000442708 TMEM132DQ14C87 1099 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 NFIL3Q16649 462 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 SPATA1Q5VX52 437 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 RBM43Q6ZSC3 357 aaKnown RBP17.39■□□□□ 0.37
USP39-205ENST00000442708 EEF2KMTQ96G04 330 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 GAS2L1Q99501 681 aaPredicted RBP17.39■□□□□ 0.37
USP39-205ENST00000442708 GTPBP4Q9BZE4 634 aaKnown RBP17.39■□□□□ 0.37
USP39-205ENST00000442708 GPR62Q9BZJ7 368 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 KIAA1586Q9HCI6 787 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 SLC38A7Q9NVC3 462 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 TMEM63CQ9P1W3 806 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 VWA8A3KMH1 1905 aa17.39■□□□□ 0.37
USP39-205ENST00000442708 SCN1AP35498 2009 aa17.38■□□□□ 0.37
USP39-205ENST00000442708 TULP1O00294 542 aaPredicted RBP17.38■□□□□ 0.37
USP39-205ENST00000442708 PPEF2O14830 753 aa17.38■□□□□ 0.37
USP39-205ENST00000442708 LMBRD2Q68DH5 695 aaPredicted RBP17.38■□□□□ 0.37
USP39-205ENST00000442708 KLHL10Q6JEL2 608 aa17.38■□□□□ 0.37
USP39-205ENST00000442708 DDX53Q86TM3 631 aaKnown RBP17.38■□□□□ 0.37
USP39-205ENST00000442708 RNF168Q8IYW5 571 aaPredicted RBP17.38■□□□□ 0.37
USP39-205ENST00000442708 TRIML1Q8N9V2 468 aa17.38■□□□□ 0.37
USP39-205ENST00000442708 MRPL38Q96DV4 380 aaKnown RBP17.38■□□□□ 0.37
USP39-205ENST00000442708 TMEM169Q96HH4 297 aa17.38■□□□□ 0.37
USP39-205ENST00000442708 MFSD14AQ96MC6 490 aa17.38■□□□□ 0.37
USP39-205ENST00000442708 POP1Q99575 1024 aaKnown RBP17.38■□□□□ 0.37
USP39-205ENST00000442708 COLEC11Q9BWP8 271 aa17.38■□□□□ 0.37
USP39-205ENST00000442708 ADAM28Q9UKQ2 775 aa17.38■□□□□ 0.37
USP39-205ENST00000442708 UBQLN1Q9UMX0 589 aaKnown RBP17.38■□□□□ 0.37
USP39-205ENST00000442708 LZTS1Q9Y250 596 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms