RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SMYD4Q8IYR2 804 aaPredicted RBP13.4□□□□□ -0.26
USP1-203ENST00000442679 GPD1LQ8N335 351 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 MICALL1Q8N3F8 863 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 GUF1Q8N442 669 aaKnown RBP13.4□□□□□ -0.26
USP1-203ENST00000442679 MICAL1Q8TDZ2 1067 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 KIF12Q96FN5 646 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 UROC1Q96N76 676 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 TSPAN18Q96SJ8 248 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 PAAF1Q9BRP4 392 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 KIAA1586Q9HCI6 787 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 RBAKQ9NYW8 714 aaPredicted RBP13.4□□□□□ -0.26
USP1-203ENST00000442679 CACNG4Q9UBN1 327 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 MAN1B1Q9UKM7 699 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 ZNF233A6NK53 670 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 F8W810 466 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 CALUO43852 315 aaPredicted RBP13.39□□□□□ -0.27
USP1-203ENST00000442679 IL18RAPO95256 599 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 CLCNKBP51801 687 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 ERVFC1P60507 584 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 SOX4Q06945 474 aaPredicted RBP13.39□□□□□ -0.27
USP1-203ENST00000442679 CCDC85BQ15834 202 aaPredicted RBP13.39□□□□□ -0.27
USP1-203ENST00000442679 ZBTB6Q15916 424 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 JADE1Q6IE81 842 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 BRSK2Q8IWQ3 736 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 C12orf56Q8IXR9 622 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 XXYLT1Q8NBI6 393 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 PPM1EQ8WY54 764 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 DDX27Q96GQ7 796 aaKnown RBP13.39□□□□□ -0.27
USP1-203ENST00000442679 CLSTN2Q9H4D0 955 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 ASB7Q9H672 318 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 GOLGA2P5Q9HBQ8 144 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 TLR9Q9NR96 1032 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 MARCH5Q9NX47 278 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 KIAA1468Q9P260 1216 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 STK39Q9UEW8 545 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 DERAQ9Y315 318 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 RALGAPA2Q2PPJ7 1873 aa13.39□□□□□ -0.27
USP1-203ENST00000442679 BIN1O00499 593 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 XPOTO43592 962 aaKnown RBP13.38□□□□□ -0.27
USP1-203ENST00000442679 EXOC3O60645 756 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 CYP3A5P20815 502 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 RPL9P32969 192 aaKnown RBP13.38□□□□□ -0.27
USP1-203ENST00000442679 IRS1P35568 1242 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 PRCPP42785 496 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 TMEM132DQ14C87 1099 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 UPP1Q16831 310 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 PDE12Q6L8Q7 609 aaKnown RBP13.38□□□□□ -0.27
USP1-203ENST00000442679 TMC7Q7Z402 723 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 CBWD2Q8IUF1 395 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 VPS52Q8N1B4 723 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 RDH13Q8NBN7 331 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 MAFAQ8NHW3 353 aaPredicted RBP13.38□□□□□ -0.27
USP1-203ENST00000442679 GPT2Q8TD30 523 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 FBXL18Q96ME1 805 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 TCF25Q9BQ70 676 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 VN1R3Q9BXE9 311 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 NGRNQ9NPE2 291 aaKnown RBP13.38□□□□□ -0.27
USP1-203ENST00000442679 ENTPD7Q9NQZ7 604 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 DMAC2Q9NW81 257 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 TUBGCP4Q9UGJ1 667 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 ADAM28Q9UKQ2 775 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 UBQLN1Q9UMX0 589 aaKnown RBP13.38□□□□□ -0.27
USP1-203ENST00000442679 TRAF3IP3Q9Y228 551 aa13.38□□□□□ -0.27
USP1-203ENST00000442679 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.38□□□□□ -0.27
USP1-203ENST00000442679 KIAA1671Q9BY89 1806 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 PODXLO00592 558 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 FSCN2O14926 492 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 B3GAT3O94766 335 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 KIF4AO95239 1232 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 CXCL14O95715 111 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 NR3C1P04150 777 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 NFICP08651 508 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 MORC3Q14149 939 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
USP1-203ENST00000442679 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
USP1-203ENST00000442679 TIGD5Q53EQ6 642 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 SPATA1Q5VX52 437 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 PLPP4Q5VZY2 271 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 TAS1R1Q7RTX1 841 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 SLC9A9Q8IVB4 645 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 ADSSL1Q8N142 457 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 BEST2Q8NFU1 509 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 HASPINQ8TF76 798 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 TMEM174Q8WUU8 243 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 NUP62CLQ9H1M0 184 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 NSUN3Q9H649 340 aaKnown RBP13.37□□□□□ -0.27
USP1-203ENST00000442679 PDE11AQ9HCR9 933 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 C2CD2Q9Y426 696 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 PCDHGC5Q9Y5F6 944 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 NLRC5Q86WI3 1866 aa13.37□□□□□ -0.27
USP1-203ENST00000442679 TMEM189-UBE2V1I3L0A0 370 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 EFEMP2O95967 443 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 SOD2P04179 222 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 BMP6P22004 513 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 IGFBP6P24592 240 aaPredicted RBP13.36□□□□□ -0.27
USP1-203ENST00000442679 LRPAP1P30533 357 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 MCM4P33991 863 aa13.36□□□□□ -0.27
USP1-203ENST00000442679 CA8P35219 290 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms