RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 EDAQ92838 391 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 CGRRF1Q99675 332 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 MYOCQ99972 504 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 C1orf112Q9NSG2 853 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 SLC23A1Q9UHI7 598 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 STXBP5LQ9Y2K9 1186 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 PCDHA3Q9Y5H8 950 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 NR2E3Q9Y5X4 410 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 KIAA0391O15091 583 aaKnown RBP6.26□□□□□ -1.41
PFDN4-202ENST00000441080 CD1AP06126 327 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 SMARCA1P28370 1054 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 CRHR2Q13324 411 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 SNAPC2Q13487 334 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 METTL24Q5JXM2 366 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 DACT2Q5SW24 774 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 SLC4A10Q6U841 1118 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 Q6ZRM9 215 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 PGBD4Q96DM1 585 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 CDK5RAP3Q96JB5 506 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 FAM193BQ96PV7 902 aaPredicted RBP6.26□□□□□ -1.41
PFDN4-202ENST00000441080 GPR87Q9BY21 358 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 KLC2Q9H0B6 622 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 PRDM11Q9NQV5 511 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 LMBRD1Q9NUN5 540 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 OBP2AQ9NY56 170 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 POGKQ9P215 609 aa6.26□□□□□ -1.41
PFDN4-202ENST00000441080 PNPLA7Q6ZV29 1317 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 TCRBV7S2A1N4TA0A589 114 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 GOLGA6L6A8MZA4 724 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 KIF3BO15066 747 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 GRM6O15303 877 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 B3GALT2O43825 422 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 UBXN7O94888 489 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 POMCP01189 267 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 AMHP03971 560 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 MTHFD1P11586 935 aaKnown RBP6.25□□□□□ -1.41
PFDN4-202ENST00000441080 MGAT1P26572 445 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 HTR1BP28222 390 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 MAN2A2P49641 1150 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 RABGGTBP53611 331 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 PRKD1Q15139 912 aaPredicted RBP6.25□□□□□ -1.41
PFDN4-202ENST00000441080 VPS72Q15906 364 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 PABPC1LQ4VXU2 614 aaKnown RBP6.25□□□□□ -1.41
PFDN4-202ENST00000441080 CCDC181Q5TID7 509 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 C1QL3Q5VWW1 255 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 DRICH1Q6PGQ1 229 aaPredicted RBP6.25□□□□□ -1.41
PFDN4-202ENST00000441080 UBE3BQ7Z3V4 1068 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 HEATR3Q7Z4Q2 680 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 OR10H5Q8NGA6 315 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 KLHDC4Q8TBB5 520 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 FAM167AQ96KS9 214 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 MNTQ99583 582 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 GABBR1Q9UBS5 961 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 ABCF2Q9UG63 623 aa6.25□□□□□ -1.41
PFDN4-202ENST00000441080 FEZ2Q9UHY8 353 aaPredicted RBP6.25□□□□□ -1.41
PFDN4-202ENST00000441080 MUSKO15146 869 aa6.24□□□□□ -1.41
PFDN4-202ENST00000441080 ALAS1P13196 640 aa6.24□□□□□ -1.41
PFDN4-202ENST00000441080 CNGB1Q14028 1251 aaPredicted RBP6.24□□□□□ -1.41
PFDN4-202ENST00000441080 GBX1Q14549 363 aa6.24□□□□□ -1.41
PFDN4-202ENST00000441080 CSRP2Q16527 193 aa6.24□□□□□ -1.41
PFDN4-202ENST00000441080 FLYWCH1Q4VC44 716 aa6.24□□□□□ -1.41
PFDN4-202ENST00000441080 OVCH2Q7RTZ1 564 aa6.24□□□□□ -1.41
PFDN4-202ENST00000441080 DAAM2Q86T65 1068 aa6.24□□□□□ -1.41
PFDN4-202ENST00000441080 NDC1Q9BTX1 674 aa6.24□□□□□ -1.41
PFDN4-202ENST00000441080 WDCPQ9H6R7 721 aa6.24□□□□□ -1.41
PFDN4-202ENST00000441080 GEMIN8Q9NWZ8 242 aaKnown RBP6.24□□□□□ -1.41
PFDN4-202ENST00000441080 DDX20Q9UHI6 824 aaKnown RBP6.24□□□□□ -1.41
PFDN4-202ENST00000441080 FRMPD2Q68DX3 1309 aaPredicted RBP6.24□□□□□ -1.41
PFDN4-202ENST00000441080 KLRG2A4D1S0 409 aaPredicted RBP6.23□□□□□ -1.41
PFDN4-202ENST00000441080 NT5C1B-RDH14C9J2C7 533 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 H3BUI4 141 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 F2RL2O00254 374 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 TUSC2O75896 110 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 SBK3P0C264 359 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 FTH1P19P0C7X4 201 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 TYRP14679 529 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 MAGEA10P43363 369 aaPredicted RBP6.23□□□□□ -1.41
PFDN4-202ENST00000441080 SCNN1GP51170 649 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 GRM3Q14832 879 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 UBXN2BQ14CS0 331 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 NAIF1Q69YI7 327 aaPredicted RBP6.23□□□□□ -1.41
PFDN4-202ENST00000441080 HTR3DQ70Z44 454 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 DGKHQ86XP1 1220 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 PALM2Q8IXS6 379 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 SH2D3CQ8N5H7 860 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 NLGN4YQ8NFZ3 816 aaPredicted RBP6.23□□□□□ -1.41
PFDN4-202ENST00000441080 DVL3Q92997 716 aaPredicted RBP6.23□□□□□ -1.41
PFDN4-202ENST00000441080 MTFMTQ96DP5 389 aaKnown RBP6.23□□□□□ -1.41
PFDN4-202ENST00000441080 SLC35A4Q96G79 324 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 PHACTR3Q96KR7 559 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 CDK5RAP1Q96SZ6 601 aaKnown RBP6.23□□□□□ -1.41
PFDN4-202ENST00000441080 LRFN3Q9BTN0 628 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 PACSIN1Q9BY11 444 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 FAM204AQ9H8W3 233 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 GNL3LQ9NVN8 582 aaKnown RBP6.23□□□□□ -1.41
PFDN4-202ENST00000441080 FBXO34Q9NWN3 711 aa6.23□□□□□ -1.41
PFDN4-202ENST00000441080 ARID1BQ8NFD5 2236 aaPredicted RBP6.22□□□□□ -1.41
PFDN4-202ENST00000441080 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 FAM227AF5H4B4 570 aa6.22□□□□□ -1.41
PFDN4-202ENST00000441080 HAUS5O94927 633 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms