RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 EXTL3O43909 919 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 IL18RAPO95256 599 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 KCNE1P15382 129 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 HOXD13P35453 343 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 TMEM132DQ14C87 1099 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 BMT2Q1RMZ1 405 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 JADE1Q6IE81 842 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 KIAA1841Q6NSI8 718 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 TMEM173Q86WV6 379 aaPredicted RBP16.86■□□□□ 0.29
TREX1-201ENST00000433541 CD302Q8IX05 232 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 VPS52Q8N1B4 723 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 RDH13Q8NBN7 331 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 C18orf25Q96B23 403 aaPredicted RBP16.86■□□□□ 0.29
TREX1-201ENST00000433541 UROC1Q96N76 676 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 PPP1R10Q96QC0 940 aaKnown RBP16.86■□□□□ 0.29
TREX1-201ENST00000433541 CGNQ9P2M7 1197 aaKnown RBP16.86■□□□□ 0.29
TREX1-201ENST00000433541 LZTS1Q9Y250 596 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 TTC26A0AVF1 554 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 ZNF233A6NK53 670 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 FAM189A1O60320 539 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 EXOC3O60645 756 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 DNAJB1P25685 340 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 CLCNKBP51801 687 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 SNRPFP62306 86 aaKnown RBP16.85■□□□□ 0.29
TREX1-201ENST00000433541 ZNF658Q5TYW1 1059 aaPredicted RBP16.85■□□□□ 0.29
TREX1-201ENST00000433541 ALKAL1Q6UXT8 129 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 XXYLT1Q8NBI6 393 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 BEST2Q8NFU1 509 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 BCL7CQ8WUZ0 217 aaPredicted RBP16.85■□□□□ 0.29
TREX1-201ENST00000433541 ZMAT2Q96NC0 199 aaKnown RBP16.85■□□□□ 0.29
TREX1-201ENST00000433541 PAAF1Q9BRP4 392 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 GTPBP4Q9BZE4 634 aaKnown RBP16.85■□□□□ 0.29
TREX1-201ENST00000433541 NSUN3Q9H649 340 aaKnown RBP16.85■□□□□ 0.29
TREX1-201ENST00000433541 KIAA1586Q9HCI6 787 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 LMBRD1Q9NUN5 540 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 STK39Q9UEW8 545 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 TUBGCP4Q9UGJ1 667 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 ADAM28Q9UKQ2 775 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 UBQLN1Q9UMX0 589 aaKnown RBP16.85■□□□□ 0.29
TREX1-201ENST00000433541 NUB1Q9Y5A7 615 aa16.85■□□□□ 0.29
TREX1-201ENST00000433541 F8W810 466 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 PODXLO00592 558 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 C2CD2LO14523 706 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 TGFB1I1O43294 461 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 B3GAT3O94766 335 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 KIF4AO95239 1232 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 URODP06132 367 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 NFICP08651 508 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 SMC1AQ14683 1233 aaKnown RBP16.84■□□□□ 0.29
TREX1-201ENST00000433541 XKR4Q5GH76 650 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 CEP135Q66GS9 1140 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 DDX53Q86TM3 631 aaKnown RBP16.84■□□□□ 0.29
TREX1-201ENST00000433541 RBM23Q86U06 439 aaKnown RBP16.84■□□□□ 0.29
TREX1-201ENST00000433541 BRSK2Q8IWQ3 736 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 ELOA2Q8IYF1 753 aaPredicted RBP16.84■□□□□ 0.29
TREX1-201ENST00000433541 GUF1Q8N442 669 aaKnown RBP16.84■□□□□ 0.29
TREX1-201ENST00000433541 ZSWIM2Q8NEG5 633 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 DDX27Q96GQ7 796 aaKnown RBP16.84■□□□□ 0.29
TREX1-201ENST00000433541 TSG101Q99816 390 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 NUP62CLQ9H1M0 184 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 IGFLR1Q9H665 355 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 ASB7Q9H672 318 aa16.84■□□□□ 0.29
TREX1-201ENST00000433541 R3HCC1Q9Y3T6 440 aaKnown RBP16.84■□□□□ 0.29
TREX1-201ENST00000433541 SF3B1O75533 1304 aaKnown RBP eCLIP16.84■□□□□ 0.29
TREX1-201ENST00000433541 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.83■□□□□ 0.28
TREX1-201ENST00000433541 PDXKO00764 312 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 CLSTN1O94985 981 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 NR3C1P04150 777 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 TMEM191BP0C7N4 346 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 IRS1P35568 1242 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 ERVFC1P60507 584 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 TFAMQ00059 246 aaKnown RBP16.83■□□□□ 0.28
TREX1-201ENST00000433541 SOX4Q06945 474 aaPredicted RBP16.83■□□□□ 0.28
TREX1-201ENST00000433541 SNRNP35Q16560 246 aaKnown RBP16.83■□□□□ 0.28
TREX1-201ENST00000433541 TCEAL5Q5H9L2 206 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 PDE12Q6L8Q7 609 aaKnown RBP16.83■□□□□ 0.28
TREX1-201ENST00000433541 FUT10Q6P4F1 479 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
TREX1-201ENST00000433541 CEP57Q86XR8 500 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 CBWD2Q8IUF1 395 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 FNBP1Q96RU3 617 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 MARCH5Q9NX47 278 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 MAN1B1Q9UKM7 699 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 PCDHGC5Q9Y5F6 944 aa16.83■□□□□ 0.28
TREX1-201ENST00000433541 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.83■□□□□ 0.28
TREX1-201ENST00000433541 PSMA7O14818 248 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 MEFVO15553 781 aaPredicted RBP16.82■□□□□ 0.28
TREX1-201ENST00000433541 TRAPPC3O43617 180 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 CXCL14O95715 111 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 DLATP10515 647 aaKnown RBP16.82■□□□□ 0.28
TREX1-201ENST00000433541 POU3F3P20264 500 aaPredicted RBP16.82■□□□□ 0.28
TREX1-201ENST00000433541 MCM4P33991 863 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 PRCPP42785 496 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 GLUD2P49448 558 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 NAB2Q15742 525 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 KLHL10Q6JEL2 608 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 DCLRE1AQ6PJP8 1040 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 CACTINQ8WUQ7 758 aaKnown RBP16.82■□□□□ 0.28
TREX1-201ENST00000433541 AUTS2Q8WXX7 1259 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms