RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 FBXL13Q8NEE6 735 aa19.71■□□□□ 0.75
HMGN1-206ENST00000431390 CAGE1Q8TC20 777 aa19.71■□□□□ 0.75
HMGN1-206ENST00000431390 ZNF516Q92618 1163 aa19.71■□□□□ 0.75
HMGN1-206ENST00000431390 ACAP3Q96P50 834 aa19.71■□□□□ 0.75
HMGN1-206ENST00000431390 CCDC94Q9BW85 323 aaPredicted RBP19.71■□□□□ 0.75
HMGN1-206ENST00000431390 NAA15Q9BXJ9 866 aaKnown RBP19.71■□□□□ 0.75
HMGN1-206ENST00000431390 NUCKS1Q9H1E3 243 aaKnown RBP19.71■□□□□ 0.75
HMGN1-206ENST00000431390 MROH7Q68CQ1 1323 aa19.71■□□□□ 0.75
HMGN1-206ENST00000431390 TRIM43BA6NCK2 446 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 GPR182O15218 404 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 C4BPAP04003 597 aaKnown RBP19.7■□□□□ 0.74
HMGN1-206ENST00000431390 CXCL8P10145 99 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 CKBP12277 381 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 ACTN1P12814 892 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 UCHL3P15374 230 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 RFX1P22670 979 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 POLR2FP61218 127 aaKnown RBP19.7■□□□□ 0.74
HMGN1-206ENST00000431390 OSTNP61366 133 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 TSR1Q2NL82 804 aaKnown RBP19.7■□□□□ 0.74
HMGN1-206ENST00000431390 FBXO47Q5MNV8 452 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 ZSCAN30Q86W11 494 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 TMEM139Q8IV31 216 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 FAM126BQ8IXS8 530 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 MAFAQ8NHW3 353 aaPredicted RBP19.7■□□□□ 0.74
HMGN1-206ENST00000431390 BAP1Q92560 729 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 TRIM43Q96BQ3 446 aaPredicted RBP19.7■□□□□ 0.74
HMGN1-206ENST00000431390 BAG1Q99933 345 aaPredicted RBP19.7■□□□□ 0.74
HMGN1-206ENST00000431390 ASB7Q9H672 318 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 CHST12Q9NRB3 414 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 ST3GAL5Q9UNP4 418 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 SKILP12757 684 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 ZNF618Q5T7W0 954 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 CD302Q8IX05 232 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 TMEM192Q8IY95 271 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 MYLIPQ8WY64 445 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 TRIM6Q9C030 488 aaPredicted RBP19.7■□□□□ 0.74
HMGN1-206ENST00000431390 ERVK-5Q9HDB9 667 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 RAB20Q9NX57 234 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 APEX2Q9UBZ4 518 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 MYO6Q9UM54 1294 aa19.7■□□□□ 0.74
HMGN1-206ENST00000431390 PTPRJQ12913 1337 aa19.69■□□□□ 0.74
HMGN1-206ENST00000431390 TULP1O00294 542 aaPredicted RBP19.69■□□□□ 0.74
HMGN1-206ENST00000431390 CD4P01730 458 aa19.69■□□□□ 0.74
HMGN1-206ENST00000431390 HNRNPH3P31942 346 aaKnown RBP19.69■□□□□ 0.74
HMGN1-206ENST00000431390 APBA1Q02410 837 aa19.69■□□□□ 0.74
HMGN1-206ENST00000431390 UBXN11Q5T124 520 aa19.69■□□□□ 0.74
HMGN1-206ENST00000431390 PDXDC1Q6P996 788 aa19.69■□□□□ 0.74
HMGN1-206ENST00000431390 FAM212AQ96EL1 285 aa19.69■□□□□ 0.74
HMGN1-206ENST00000431390 EIF2AQ9BY44 585 aaKnown RBP19.69■□□□□ 0.74
HMGN1-206ENST00000431390 TTYH1Q9H313 450 aaPredicted RBP19.69■□□□□ 0.74
HMGN1-206ENST00000431390 PLEKHA5Q9HAU0 1116 aa19.69■□□□□ 0.74
HMGN1-206ENST00000431390 ZC3H11AO75152 810 aaKnown RBP eCLIP19.68■□□□□ 0.74
HMGN1-206ENST00000431390 MEA1Q16626 185 aa19.68■□□□□ 0.74
HMGN1-206ENST00000431390 DUOXA2Q1HG44 320 aa19.68■□□□□ 0.74
HMGN1-206ENST00000431390 SLC10A6Q3KNW5 377 aa19.68■□□□□ 0.74
HMGN1-206ENST00000431390 TDRD10Q5VZ19 366 aaKnown RBP19.68■□□□□ 0.74
HMGN1-206ENST00000431390 LMBRD2Q68DH5 695 aaPredicted RBP19.68■□□□□ 0.74
HMGN1-206ENST00000431390 NT5DC4Q86YG4 428 aa19.68■□□□□ 0.74
HMGN1-206ENST00000431390 TAS1R2Q8TE23 839 aa19.68■□□□□ 0.74
HMGN1-206ENST00000431390 SYN2Q92777 582 aaPredicted RBP19.68■□□□□ 0.74
HMGN1-206ENST00000431390 NLRC4Q9NPP4 1024 aa19.68■□□□□ 0.74
HMGN1-206ENST00000431390 ZNHIT6Q9NWK9 470 aaKnown RBP19.68■□□□□ 0.74
HMGN1-206ENST00000431390 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.68■□□□□ 0.74
HMGN1-206ENST00000431390 PLAGL2Q9UPG8 496 aa19.68■□□□□ 0.74
HMGN1-206ENST00000431390 FHOD1Q9Y613 1164 aa19.68■□□□□ 0.74
HMGN1-206ENST00000431390 CDH23Q9H251 3354 aa19.68■□□□□ 0.74
HMGN1-206ENST00000431390 LRRC53A6NM62 1247 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 LACTBL1A8MY62 500 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 TLR3O15455 904 aaKnown RBP19.67■□□□□ 0.74
HMGN1-206ENST00000431390 ARHGAP6O43182 974 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 GHRP10912 638 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 KCNJ6P48051 423 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 SMAD3P84022 425 aaKnown RBP19.67■□□□□ 0.74
HMGN1-206ENST00000431390 TLE2Q04725 743 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 NFX1Q12986 1120 aaKnown RBP19.67■□□□□ 0.74
HMGN1-206ENST00000431390 PAK2Q13177 524 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 BIRC3Q13489 604 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 BFSP2Q13515 415 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 LPIN1Q14693 890 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 C1orf53Q5VUE5 145 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 TWF2Q6IBS0 349 aaKnown RBP19.67■□□□□ 0.74
HMGN1-206ENST00000431390 TRAF7Q6Q0C0 670 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 RRAGAQ7L523 313 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 TMTC1Q8IUR5 882 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 OR5B17Q8NGF7 314 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 SEMA4DQ92854 862 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 ANKRD36BP1Q96IX9 119 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 AGO3Q9H9G7 860 aaKnown RBP19.67■□□□□ 0.74
HMGN1-206ENST00000431390 PADI3Q9ULW8 664 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 VCANP13611 3396 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 PRUNE2Q8WUY3 3088 aa19.67■□□□□ 0.74
HMGN1-206ENST00000431390 MEFVO15553 781 aaPredicted RBP19.66■□□□□ 0.74
HMGN1-206ENST00000431390 TMEM191BP0C7N4 346 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 ITGB8P26012 769 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 YARSP54577 528 aaKnown RBP19.66■□□□□ 0.74
HMGN1-206ENST00000431390 CDK17Q00537 523 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 IQCEQ6IPM2 695 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 ANKRD33Q7Z3H0 272 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 EFCAB13Q8IY85 973 aa19.66■□□□□ 0.74
HMGN1-206ENST00000431390 SPAG5Q96R06 1193 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms