RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 AGBL2Q5U5Z8 902 aa20.83■□□□□ 0.93
HCG18-235ENST00000426882 SPATA21Q7Z572 469 aa20.83■□□□□ 0.93
HCG18-235ENST00000426882 EXT2Q93063 718 aa20.83■□□□□ 0.93
HCG18-235ENST00000426882 PI4K2AQ9BTU6 479 aa20.83■□□□□ 0.93
HCG18-235ENST00000426882 AGAP1Q9UPQ3 857 aa20.83■□□□□ 0.93
HCG18-235ENST00000426882 LMNAP02545 664 aaKnown RBP20.83■□□□□ 0.92
HCG18-235ENST00000426882 OCRLQ01968 901 aa20.83■□□□□ 0.92
HCG18-235ENST00000426882 SMAD1Q15797 465 aaKnown RBP20.83■□□□□ 0.92
HCG18-235ENST00000426882 MOXD1Q6UVY6 613 aa20.83■□□□□ 0.92
HCG18-235ENST00000426882 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.83■□□□□ 0.92
HCG18-235ENST00000426882 MCEEQ96PE7 176 aa20.83■□□□□ 0.92
HCG18-235ENST00000426882 CARD9Q9H257 536 aa20.83■□□□□ 0.92
HCG18-235ENST00000426882 KPNA7A9QM74 516 aa20.83■□□□□ 0.92
HCG18-235ENST00000426882 CDK17Q00537 523 aa20.83■□□□□ 0.92
HCG18-235ENST00000426882 KCNV1Q6PIU1 500 aa20.83■□□□□ 0.92
HCG18-235ENST00000426882 THAP2Q9H0W7 228 aa20.83■□□□□ 0.92
HCG18-235ENST00000426882 PAMP19021 973 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 CASP4P49662 377 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 PMS1P54277 932 aaKnown RBP20.82■□□□□ 0.92
HCG18-235ENST00000426882 COPS2P61201 443 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 AP1B1Q10567 949 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 SGSM1Q2NKQ1 1148 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 EFHC2Q5JST6 749 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 PAPD7Q5XG87 772 aaKnown RBP20.82■□□□□ 0.92
HCG18-235ENST00000426882 SCN4BQ8IWT1 228 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 ACER1Q8TDN7 264 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 FAM118BQ9BPY3 351 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 UNC45AQ9H3U1 944 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 ANKEF1Q9NU02 776 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 GGT7Q9UJ14 662 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 CFAP73A6NFT4 308 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 C19orf81C9J6K1 198 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 COPB2P35606 906 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 EPHB1P54762 984 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 RPS6P62753 249 aaKnown RBP20.82■□□□□ 0.92
HCG18-235ENST00000426882 MXD4Q14582 209 aaPredicted RBP20.82■□□□□ 0.92
HCG18-235ENST00000426882 ACAP3Q96P50 834 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 XPO6Q96QU8 1125 aaKnown RBP20.82■□□□□ 0.92
HCG18-235ENST00000426882 PIK3R2O00459 728 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 TRPA1O75762 1119 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 SNRPFP62306 86 aaKnown RBP20.82■□□□□ 0.92
HCG18-235ENST00000426882 CDR2Q01850 454 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 C3orf67Q6ZVT6 689 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 FSD1LQ9BXM9 530 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 RIOX1Q9H6W3 641 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 WDR35Q9P2L0 1181 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 L1RE1Q9UN81 338 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 CFAP69A5D8W1 941 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 SEC24CP53992 1094 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 NME3Q13232 169 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 NT5DC1Q5TFE4 455 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 RPAINQ86UA6 219 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 PARP9Q8IXQ6 854 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 FAM96AQ9H5X1 160 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 ALG13Q9NP73 1137 aaKnown RBP20.82■□□□□ 0.92
HCG18-235ENST00000426882 ARHGAP20Q9P2F6 1191 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 STOML1Q9UBI4 398 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 IGSF9BQ9UPX0 1349 aa20.82■□□□□ 0.92
HCG18-235ENST00000426882 ASB14A6NK59 587 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 GOLGA8RI6L899 631 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 PDGFRAP16234 1089 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 SATB1Q01826 763 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 GIT2Q14161 759 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 KIFC3Q9BVG8 833 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 IL17RBQ9NRM6 502 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 FOXN3O00409 490 aaPredicted RBP20.81■□□□□ 0.92
HCG18-235ENST00000426882 APOL1O14791 398 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 TAC1P20366 129 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 KYNUQ16719 465 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 THEM5Q8N1Q8 247 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 TAAR1Q96RJ0 339 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 TTC1Q99614 292 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 TRIM66O15016 1216 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 MAFGO15525 162 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 FSCBQ5H9T9 825 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 RBM46Q8TBY0 533 aaKnown RBP20.81■□□□□ 0.92
HCG18-235ENST00000426882 PACSIN1Q9BY11 444 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 SMYD3Q9H7B4 428 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 ARL2BPQ9Y2Y0 163 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 NEU2Q9Y3R4 380 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 ASAP2O43150 1006 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 SREBF1P36956 1147 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 ATG4CQ96DT6 458 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 KLC4Q9NSK0 619 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 DONSONQ9NYP3 566 aa20.81■□□□□ 0.92
HCG18-235ENST00000426882 ZFXP17010 805 aaPredicted RBP20.8■□□□□ 0.92
HCG18-235ENST00000426882 PRLRP16471 622 aa20.8■□□□□ 0.92
HCG18-235ENST00000426882 TKFCQ3LXA3 575 aa20.8■□□□□ 0.92
HCG18-235ENST00000426882 SYCP2LQ5T4T6 812 aa20.8■□□□□ 0.92
HCG18-235ENST00000426882 KCNV2Q8TDN2 545 aa20.8■□□□□ 0.92
HCG18-235ENST00000426882 SCFD1Q8WVM8 642 aa20.8■□□□□ 0.92
HCG18-235ENST00000426882 A0A087X0B3 334 aa20.8■□□□□ 0.92
HCG18-235ENST00000426882 XPAP23025 273 aaPredicted RBP20.8■□□□□ 0.92
HCG18-235ENST00000426882 PIGHQ14442 188 aaPredicted RBP20.8■□□□□ 0.92
HCG18-235ENST00000426882 TARS2Q9BW92 718 aaKnown RBP20.8■□□□□ 0.92
HCG18-235ENST00000426882 GTF3C4Q9UKN8 822 aa20.8■□□□□ 0.92
HCG18-235ENST00000426882 GYS1P13807 737 aa20.79■□□□□ 0.92
HCG18-235ENST00000426882 TYK2P29597 1187 aa20.79■□□□□ 0.92
HCG18-235ENST00000426882 KYAT1Q16773 422 aa20.79■□□□□ 0.92
HCG18-235ENST00000426882 CCNYL1Q8N7R7 359 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms