RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 AOC3Q16853 763 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 ACCSLQ4AC99 568 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 ZC3H12AQ5D1E8 599 aaKnown RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 FITM2Q8N6M3 262 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 VCPIP1Q96JH7 1222 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 TGS1Q96RS0 853 aaKnown RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 PHACTR1Q9C0D0 580 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 CCDC113Q9H0I3 377 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 LRMDAQ9H2I8 198 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 SSU72Q9NP77 194 aaKnown RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 SMG5Q9UPR3 1016 aaKnown RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 NAALADL1Q9UQQ1 740 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 PTPN22Q9Y2R2 807 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 FAM47DPA6NHR8 397 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 TRAFD1O14545 582 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-204ENST00000424143 ABLIM1O14639 778 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 CHMP2AO43633 222 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 ARP10275 920 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 UNGP13051 313 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-204ENST00000424143 MAPK4P31152 587 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 CHKAP35790 457 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 SNAP25P60880 206 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 MYO1EQ12965 1108 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 SLC27A3Q5K4L6 730 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 CHADLQ6NUI6 762 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 ZNF746Q6NUN9 644 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-204ENST00000424143 TRIM72Q6ZMU5 477 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 HAUS6Q7Z4H7 955 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 SLC47A2Q86VL8 602 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 CCDC25Q86WR0 208 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 KATNAL2Q8IYT4 538 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 ZCCHC9Q8N567 271 aaKnown RBP16.22■□□□□ 0.19
C9orf3-204ENST00000424143 TEX9Q8N6V9 391 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 ZNF398Q8TD17 642 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 DENND1AQ8TEH3 1009 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 PARD3BQ8TEW8 1205 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 DDX27Q96GQ7 796 aaKnown RBP16.22■□□□□ 0.19
C9orf3-204ENST00000424143 CBWD1Q9BRT8 395 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 ANKEF1Q9NU02 776 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 SLC5A4Q9NY91 659 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 FETUBQ9UGM5 382 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 NFASCO94856 1347 aa16.22■□□□□ 0.19
C9orf3-204ENST00000424143 RAD21O60216 631 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 ACSL3O95573 720 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 CFBP00751 764 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 KRT16P08779 473 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 ABCD1P33897 745 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 RARRES1P49788 294 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 HSD17B4P51659 736 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 ZKSCAN8Q15776 578 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-204ENST00000424143 KYNUQ16719 465 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 CCDC38Q502W7 563 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 C4orf19Q8IY42 314 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 MCOLN2Q8IZK6 566 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 RDH13Q8NBN7 331 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 FBXL13Q8NEE6 735 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 UHMK1Q8TAS1 419 aaKnown RBP16.21■□□□□ 0.19
C9orf3-204ENST00000424143 C1orf54Q8WWF1 131 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 KCNN1Q92952 543 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 KAT5Q92993 513 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 CFAP57Q96MR6 1250 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 C17orf75Q9HAS0 396 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 KCNK9Q9NPC2 374 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 LRRC4BQ9NT99 713 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 MAP3K20Q9NYL2 800 aaKnown RBP16.21■□□□□ 0.19
C9orf3-204ENST00000424143 ADAM22Q9P0K1 906 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 CD2APQ9Y5K6 639 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 USH1CQ9Y6N9 552 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 SLX4Q8IY92 1834 aa16.21■□□□□ 0.19
C9orf3-204ENST00000424143 ZNFX1Q9P2E3 1918 aaKnown RBP16.21■□□□□ 0.19
C9orf3-204ENST00000424143 DCTN3O75935 186 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 PROSCO94903 275 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 ASMTLO95671 621 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 RXRBP28702 533 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 QARSP47897 775 aaKnown RBP16.2■□□□□ 0.18
C9orf3-204ENST00000424143 DACT2Q5SW24 774 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 CGB2Q6NT52 195 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 MAP4K3Q8IVH8 894 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 PPM1KQ8N3J5 372 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 OGFOD1Q8N543 542 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 EXD1Q8NHP7 514 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 SPIRE2Q8WWL2 714 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 TBC1D31Q96DN5 1066 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 FAXDC2Q96IV6 333 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 NTPCRQ9BSD7 190 aaKnown RBP16.2■□□□□ 0.18
C9orf3-204ENST00000424143 TRIM6Q9C030 488 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-204ENST00000424143 CHST7Q9NS84 486 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 LRRC42Q9Y546 428 aa16.2■□□□□ 0.18
C9orf3-204ENST00000424143 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 DHX15O43143 795 aaKnown RBP16.19■□□□□ 0.18
C9orf3-204ENST00000424143 GH2P01242 217 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 ADRB2P07550 413 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 DLATP10515 647 aaKnown RBP16.19■□□□□ 0.18
C9orf3-204ENST00000424143 SCP2P22307 547 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 KLRC2P26717 231 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 ALDH3A1P30838 453 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 ADCY8P40145 1251 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 RASSF2P50749 326 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 POLGP54098 1239 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms