RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 HASPINQ8TF76 798 aa13.58□□□□□ -0.24
SKA1-203ENST00000417656 C18orf25Q96B23 403 aaPredicted RBP13.58□□□□□ -0.24
SKA1-203ENST00000417656 FAM212AQ96EL1 285 aa13.58□□□□□ -0.24
SKA1-203ENST00000417656 VN1R3Q9BXE9 311 aa13.58□□□□□ -0.24
SKA1-203ENST00000417656 TLR9Q9NR96 1032 aa13.58□□□□□ -0.24
SKA1-203ENST00000417656 LMBRD1Q9NUN5 540 aa13.58□□□□□ -0.24
SKA1-203ENST00000417656 RMND1Q9NWS8 449 aa13.58□□□□□ -0.24
SKA1-203ENST00000417656 TUBGCP4Q9UGJ1 667 aa13.58□□□□□ -0.24
SKA1-203ENST00000417656 MAPK8IP1Q9UQF2 711 aa13.58□□□□□ -0.24
SKA1-203ENST00000417656 CARNS1A5YM72 827 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 CLIC2O15247 247 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 EXTL3O43909 919 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 KIF4AO95239 1232 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 ALDH2P05091 517 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 NFICP08651 508 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 CYP2J2P51589 502 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 WNT7BP56706 349 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 KRT17Q04695 432 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 HSP90AA2PQ14568 343 aaPredicted RBP13.57□□□□□ -0.24
SKA1-203ENST00000417656 CCDC85BQ15834 202 aaPredicted RBP13.57□□□□□ -0.24
SKA1-203ENST00000417656 PLPP4Q5VZY2 271 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 BRSK2Q8IWQ3 736 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 ELOA2Q8IYF1 753 aaPredicted RBP13.57□□□□□ -0.24
SKA1-203ENST00000417656 GPD1LQ8N335 351 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 GSDMAQ96QA5 445 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 PLEKHA5Q9HAU0 1116 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 SLC38A7Q9NVC3 462 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 HSPBP1Q9NZL4 362 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 LMCD1Q9NZU5 365 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 LZTS1Q9Y250 596 aa13.57□□□□□ -0.24
SKA1-203ENST00000417656 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
SKA1-203ENST00000417656 FSCN2O14926 492 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 CLCNKBP51801 687 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 GUCY2FP51841 1108 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 ERVFC1P60507 584 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 CAMK4Q16566 473 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 JADE1Q6IE81 842 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 DDX53Q86TM3 631 aaKnown RBP13.56□□□□□ -0.24
SKA1-203ENST00000417656 CBWD2Q8IUF1 395 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 C3orf58Q8NDZ4 430 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 SPATA20Q8TB22 786 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 TCF25Q9BQ70 676 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 COLEC11Q9BWP8 271 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 ZBP1Q9H171 429 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 KCTD10Q9H3F6 313 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 NSUN3Q9H649 340 aaKnown RBP13.56□□□□□ -0.24
SKA1-203ENST00000417656 ENTPD7Q9NQZ7 604 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 RBAKQ9NYW8 714 aaPredicted RBP13.56□□□□□ -0.24
SKA1-203ENST00000417656 PUF60Q9UHX1 559 aaKnown RBP13.56□□□□□ -0.24
SKA1-203ENST00000417656 MAN1B1Q9UKM7 699 aa13.56□□□□□ -0.24
SKA1-203ENST00000417656 GOLGA6L22H0YM25 854 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 PODXLO00592 558 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 KIAA0391O15091 583 aaKnown RBP13.55□□□□□ -0.24
SKA1-203ENST00000417656 LDHAP00338 332 aaKnown RBP13.55□□□□□ -0.24
SKA1-203ENST00000417656 ADRB2P07550 413 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 IGFBP6P24592 240 aaPredicted RBP13.55□□□□□ -0.24
SKA1-203ENST00000417656 CA8P35219 290 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 SNRPFP62306 86 aaKnown RBP13.55□□□□□ -0.24
SKA1-203ENST00000417656 TMEM132DQ14C87 1099 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 TCEAL5Q5H9L2 206 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 ZNF658Q5TYW1 1059 aaPredicted RBP13.55□□□□□ -0.24
SKA1-203ENST00000417656 ISM2Q6H9L7 571 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 FUT10Q6P4F1 479 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 ADGRD2Q7Z7M1 963 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 CD302Q8IX05 232 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 C12orf56Q8IXR9 622 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 EFCAB13Q8IY85 973 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 VPS52Q8N1B4 723 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 GUF1Q8N442 669 aaKnown RBP13.55□□□□□ -0.24
SKA1-203ENST00000417656 AUTS2Q8WXX7 1259 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 FAM84AQ96KN4 292 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 UROC1Q96N76 676 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 HERC2P3Q9BVR0 1158 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 CLSTN2Q9H4D0 955 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 ADAM28Q9UKQ2 775 aa13.55□□□□□ -0.24
SKA1-203ENST00000417656 UBQLN1Q9UMX0 589 aaKnown RBP13.55□□□□□ -0.24
SKA1-203ENST00000417656 VWA8A3KMH1 1905 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 EYSQ5T1H1 3165 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 BIN1O00499 593 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 KIF20AO95235 890 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 IL18RAPO95256 599 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 EFEMP2O95967 443 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 POU5F1Q01860 360 aaKnown RBP13.54□□□□□ -0.24
SKA1-203ENST00000417656 ZBTB6Q15916 424 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 UPP1Q16831 310 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 TMC7Q7Z402 723 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 RNF168Q8IYW5 571 aaPredicted RBP13.54□□□□□ -0.24
SKA1-203ENST00000417656 XXYLT1Q8NBI6 393 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 GOLGA5Q8TBA6 731 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 MICAL1Q8TDZ2 1067 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 B3GALT6Q96L58 329 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 FBXL18Q96ME1 805 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 GPR62Q9BZJ7 368 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 ASB7Q9H672 318 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 CGNQ9P2M7 1197 aaKnown RBP13.54□□□□□ -0.24
SKA1-203ENST00000417656 TSC2P49815 1807 aa13.54□□□□□ -0.24
SKA1-203ENST00000417656 SF3B1O75533 1304 aaKnown RBP eCLIP13.54□□□□□ -0.241e-7■■■■■ 172.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms