RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 JMJD4Q9H9V9 463 aa8.94□□□□□ -0.98
CTNND1-206ENST00000415361 MRGBPQ9NV56 204 aa8.94□□□□□ -0.98
CTNND1-206ENST00000415361 HEY1Q9Y5J3 304 aa8.94□□□□□ -0.98
CTNND1-206ENST00000415361 GRIK1P39086 918 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 EXOSC10Q01780 885 aaKnown RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 ZBTB17Q13105 803 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 ZNF394Q53GI3 561 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 MEI1Q5TIA1 1274 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 ATP11CQ8NB49 1132 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 SCFD1Q8WVM8 642 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 DPF2Q92785 391 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 AAASQ9NRG9 546 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 GTSE1Q9NYZ3 720 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 PYCARDQ9ULZ3 195 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 PDS5AQ29RF7 1337 aaKnown RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 CXCR5P32302 372 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 HADHAP40939 763 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 DHX34Q14147 1143 aaKnown RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 MORF4L2Q15014 288 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 SV2CQ496J9 727 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 FAM102AQ5T9C2 384 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 RDM1Q8NG50 284 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 TSPAN17Q96FV3 270 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 TRIM4Q9C037 500 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 SUDS3Q9H7L9 328 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 RRAGDQ9NQL2 400 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 NSMCE4AQ9NXX6 385 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 PIN4Q9Y237 131 aaKnown RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 LRRC53A6NM62 1247 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 SPAG7O75391 227 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 TADA2AO75478 443 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 CPT1AP50416 773 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 MED21Q13503 144 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 TAS2R42Q7RTR8 314 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 HAUS6Q7Z4H7 955 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 TRIM59Q8IWR1 403 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 SEPT1Q8WYJ6 367 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 SCOCQ9UIL1 159 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 ZC3H4Q9UPT8 1303 aaKnown RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 PIK3R2O00459 728 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 CFLARO15519 480 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 RTN2O75298 545 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 PGK2P07205 417 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 EEF1B2P24534 225 aaKnown RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 RGS2P41220 211 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 CAPRIN1Q14444 709 aaKnown RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 DRAP1Q14919 205 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 SDE2Q6IQ49 451 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 PATL1Q86TB9 770 aaKnown RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 FAM83AQ86UY5 434 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 SLC26A7Q8TE54 656 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.93□□□□□ -0.984e-16■□□□□ 9.4
CTNND1-206ENST00000415361 PITPNM3Q9BZ71 974 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 GPRC5DQ9NZD1 345 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 FAM205AQ6ZU69 1335 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 MCF2P10911 925 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 CASP1P29466 404 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 SLCO1A2P46721 670 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 ANTXR2P58335 489 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 ATP2C1P98194 919 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 NME3Q13232 169 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 EFTUD2Q15029 972 aaKnown RBP eCLIP8.93□□□□□ -0.983e-8■■■■■ 29.5
CTNND1-206ENST00000415361 C4orf22Q6V702 233 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 EPM2AIP1Q7L775 607 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-206ENST00000415361 PLEKHH3Q7Z736 793 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 RCOR2Q8IZ40 523 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 OR9Q1Q8NGQ5 310 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 RGL1Q9NZL6 768 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 PCDHGB4Q9UN71 923 aa8.93□□□□□ -0.98
CTNND1-206ENST00000415361 PDHXO00330 501 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 KRT16P08779 473 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 AARSP49588 968 aaKnown RBP eCLIP8.92□□□□□ -0.983e-6■□□□□ 10.9
CTNND1-206ENST00000415361 TPI1P60174 286 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 RPS6P62753 249 aaKnown RBP8.92□□□□□ -0.98
CTNND1-206ENST00000415361 EIF2B5Q13144 721 aaKnown RBP8.92□□□□□ -0.98
CTNND1-206ENST00000415361 LBRQ14739 615 aaKnown RBP8.92□□□□□ -0.98
CTNND1-206ENST00000415361 RBBP7Q16576 425 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 ARHGAP15Q53QZ3 475 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 FAM117BQ6P1L5 589 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 PASD1Q8IV76 773 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 PPCSQ9HAB8 311 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 NDFIP2Q9NV92 336 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 ROBO1Q9Y6N7 1651 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 IFT172Q9UG01 1749 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 GAS2O43903 313 aaKnown RBP8.92□□□□□ -0.98
CTNND1-206ENST00000415361 DNAJC6O75061 913 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 TRPA1O75762 1119 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 ACSL3O95573 720 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 PRCPP42785 496 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 LIG3P49916 1009 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 ABCE1P61221 599 aaKnown RBP8.92□□□□□ -0.98
CTNND1-206ENST00000415361 TMEM62Q0P6H9 643 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 TMEM132DQ14C87 1099 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 SGSM1Q2NKQ1 1148 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 CXorf38Q8TB03 319 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 RFFLQ8WZ73 363 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 VPS11Q9H270 941 aa8.92□□□□□ -0.98
CTNND1-206ENST00000415361 DHX35Q9H5Z1 703 aaKnown RBP8.92□□□□□ -0.98
CTNND1-206ENST00000415361 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-206ENST00000415361 TAF6LQ9Y6J9 622 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms