RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 PTPN14Q15678 1187 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 FUT10Q6P4F1 479 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 STXBP4Q6ZWJ1 553 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 EPM2AIP1Q7L775 607 aaPredicted RBP17.79■□□□□ 0.44
NOD1-202ENST00000411552 SYCP3Q8IZU3 236 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 VN1R2Q8NFZ6 395 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 HASPINQ8TF76 798 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 POMGNT1Q8WZA1 660 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 C18orf25Q96B23 403 aaPredicted RBP17.79■□□□□ 0.44
NOD1-202ENST00000411552 CDCA3Q99618 268 aaPredicted RBP17.79■□□□□ 0.44
NOD1-202ENST00000411552 HERC2P3Q9BVR0 1158 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 PLEKHA5Q9HAU0 1116 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 CPSF3Q9UKF6 684 aaKnown RBP17.79■□□□□ 0.44
NOD1-202ENST00000411552 AGO2Q9UKV8 859 aaKnown RBP17.79■□□□□ 0.44
NOD1-202ENST00000411552 IRAK3Q9Y616 596 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 ANK1P16157 1881 aa17.79■□□□□ 0.44
NOD1-202ENST00000411552 GOLGA6L4A6NEF3 574 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 LACTBL1A8MY62 500 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 H3BQ06 376 aaPredicted RBP17.78■□□□□ 0.44
NOD1-202ENST00000411552 KLRC4O43908 158 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 TADA2AO75478 443 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 ZNF202O95125 648 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 IGFBP6P24592 240 aaPredicted RBP17.78■□□□□ 0.44
NOD1-202ENST00000411552 HOXD13P35453 343 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 ACOT2P49753 483 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 CLCNKBP51801 687 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 PPP2R3AQ06190 1150 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 POSTNQ15063 836 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 UPP1Q16831 310 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 LEXMQ3ZCV2 418 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 TJAP1Q5JTD0 557 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 KRBA2Q6ZNG9 492 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 B3GALT6Q96L58 329 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 UROC1Q96N76 676 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 TMEM206Q9H813 350 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 RPF1Q9H9Y2 349 aaKnown RBP17.78■□□□□ 0.44
NOD1-202ENST00000411552 TCF20Q9UGU0 1960 aaKnown RBP17.78■□□□□ 0.44
NOD1-202ENST00000411552 C5orf42Q9H799 3197 aa17.78■□□□□ 0.44
NOD1-202ENST00000411552 SF3B1O75533 1304 aaKnown RBP eCLIP17.77■□□□□ 0.44
NOD1-202ENST00000411552 FSD2A1L4K1 749 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 C2CD2LO14523 706 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 EIF3DO15371 548 aaKnown RBP eCLIP17.77■□□□□ 0.44
NOD1-202ENST00000411552 LILRB3O75022 631 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 CLASP2O75122 1294 aaKnown RBP17.77■□□□□ 0.44
NOD1-202ENST00000411552 MYL1P05976 194 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 URODP06132 367 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 ADRB2P07550 413 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 GLUD2P49448 558 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 NDUFV1P49821 464 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 SPAG1Q07617 926 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 KCNC3Q14003 757 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 DCLRE1AQ6PJP8 1040 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 MRPL17Q9NRX2 175 aaKnown RBP17.77■□□□□ 0.44
NOD1-202ENST00000411552 CHST7Q9NS84 486 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 CHMP5Q9NZZ3 219 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 CLEC1BQ9P126 229 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 TUBGCP4Q9UGJ1 667 aa17.77■□□□□ 0.44
NOD1-202ENST00000411552 BARX2Q9UMQ3 279 aaPredicted RBP17.77■□□□□ 0.44
NOD1-202ENST00000411552 TTC28Q96AY4 2481 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 TMEM189-UBE2V1I3L0A0 370 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 B3GAT3O94766 335 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 BMP1P13497 986 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 DSG1Q02413 1049 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 USP41Q3LFD5 358 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 KMT5BQ4FZB7 885 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 KIAA0319Q5VV43 1072 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 LLGL2Q6P1M3 1020 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 CD300LGQ6UXG3 332 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 CRELD2Q6UXH1 353 aaPredicted RBP17.76■□□□□ 0.43
NOD1-202ENST00000411552 TMEM130Q8N3G9 435 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 C3orf58Q8NDZ4 430 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 ZSWIM2Q8NEG5 633 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.76■□□□□ 0.43
NOD1-202ENST00000411552 ZNF507Q8TCN5 953 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 SCFD1Q8WVM8 642 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 FAM212AQ96EL1 285 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 KIF12Q96FN5 646 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 DDX27Q96GQ7 796 aaKnown RBP17.76■□□□□ 0.43
NOD1-202ENST00000411552 CBWD1Q9BRT8 395 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 SLC39A2Q9NP94 309 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 EXOC1Q9NV70 894 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 VWA8A3KMH1 1905 aa17.76■□□□□ 0.43
NOD1-202ENST00000411552 UBE4BO95155 1302 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 PODXLO00592 558 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 CNPP09543 421 aaKnown RBP17.75■□□□□ 0.43
NOD1-202ENST00000411552 GARTP22102 1010 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 RPL9P32969 192 aaKnown RBP17.75■□□□□ 0.43
NOD1-202ENST00000411552 CLUL1Q15846 466 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 ZBTB6Q15916 424 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 FAM171A1Q5VUB5 890 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 KIAA1841Q6NSI8 718 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 TMEM184AQ6ZMB5 413 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 FMR1NBQ8N0W7 255 aaPredicted RBP17.75■□□□□ 0.43
NOD1-202ENST00000411552 TMEM87AQ8NBN3 555 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 SAAL1Q96ER3 474 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 MSLNLQ96KJ4 702 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 FAM213AQ9BRX8 229 aa17.75■□□□□ 0.43
NOD1-202ENST00000411552 SSX2IPQ9Y2D8 614 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms