RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 ATG16L1Q676U5 607 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 GALNT17Q6IS24 598 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 RSBN1LQ6PCB5 846 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-203ENST00000406072 C1orf228Q6PIY5 440 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 B3GNT6Q6ZMB0 384 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 NLRP9Q7RTR0 991 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 FOXP4Q8IVH2 680 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-203ENST00000406072 IQCKQ8N0W5 287 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 ZNF280CQ8ND82 737 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 STKLD1Q8NE28 680 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 RASGRP4Q8TDF6 673 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 OXER1Q8TDS5 423 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 CCT6BQ92526 530 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 PPP1R14BQ96C90 147 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 C9orf72Q96LT7 481 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 ERP44Q9BS26 406 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 TRPV6Q9H1D0 765 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 CEP72Q9P209 647 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 FBXO2Q9UK22 296 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-203ENST00000406072 PHTF1Q9UMS5 762 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 RNF103-CHMP3A0A140T963 221 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 GOLGA8RI6L899 631 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 LRRN2O75325 713 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 PGM3O95394 542 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 SHBGP04278 402 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 BASP1P80723 227 aaKnown RBP6.2□□□□□ -1.42
HDAC9-203ENST00000406072 OVGP1Q12889 678 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 DHX34Q14147 1143 aaKnown RBP6.2□□□□□ -1.42
HDAC9-203ENST00000406072 BBS9Q3SYG4 887 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 TAF1BQ53T94 588 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-203ENST00000406072 DCUN1D2Q6PH85 259 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 MARK2Q7KZI7 788 aaKnown RBP6.2□□□□□ -1.42
HDAC9-203ENST00000406072 HEATR4Q86WZ0 1026 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 CCNJLQ8IV13 435 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 LCORLQ8N3X6 602 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 PYROXD1Q8WU10 500 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 RNF26Q9BY78 433 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-203ENST00000406072 ZWILCHQ9H900 591 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 DISC1Q9NRI5 854 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 HEY2Q9UBP5 337 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 PGAP2Q9UHJ9 254 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 TNKSO95271 1327 aa6.2□□□□□ -1.42
HDAC9-203ENST00000406072 USP17L3A6NCW0 530 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 USP17L4A6NCW7 530 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 F8VZ95 297 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 SH2B2O14492 632 aaPredicted RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 DPEP1P16444 411 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 POLGP54098 1239 aaPredicted RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 ALDH18A1P54886 795 aaKnown RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 ARPC4P59998 168 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 NCALDP61601 193 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 DNAL1Q4LDG9 190 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 ERMARDQ5T6L9 678 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 WDR78Q5VTH9 848 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 POTEEQ6S8J3 1075 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 C16orf86Q6ZW13 317 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 USP17L1Q7RTZ2 530 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 KRT25Q7Z3Z0 450 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 MTDHQ86UE4 582 aaKnown RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 SFR1Q86XK3 245 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 DDI1Q8WTU0 396 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 GPKOWQ92917 476 aaPredicted RBP eCLIP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 ROPN1BQ9BZX4 212 aaPredicted RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 RANBP17Q9H2T7 1088 aaKnown RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 ROPN1Q9HAT0 212 aaPredicted RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 INTS13Q9NVM9 706 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 TMOD4Q9NZQ9 345 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 DIS3Q9Y2L1 958 aaKnown RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 SYNGAP1Q96PV0 1343 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 TRIM43BA6NCK2 446 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 SGK1O00141 431 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 ECE2O60344 883 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 DDHD2O94830 711 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 TTC4O95801 387 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 VAV1P15498 845 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 ALOX15P16050 662 aaPredicted RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 CD44P16070 742 aaKnown RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 PLCG1P19174 1290 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 SERPINB1P30740 379 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 COPB2P35606 906 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 TRAPPC10P48553 1259 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 CYP2J2P51589 502 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 PPP2R5DQ14738 602 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 LBRQ14739 615 aaKnown RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 LACTB2Q53H82 288 aaPredicted RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 C12orf60Q5U649 245 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 TSHZ1Q6ZSZ6 1077 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 GPBP1Q86WP2 473 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 JAMLQ86YT9 394 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 GJA10Q969M2 543 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 OMA1Q96E52 524 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 DCUN1D5Q9BTE7 237 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 DCP1AQ9NPI6 582 aaPredicted RBP6.19□□□□□ -1.42
HDAC9-203ENST00000406072 ZSWIM5Q9P217 1185 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 STRIP2Q9ULQ0 834 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 DOLKQ9UPQ8 538 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 DTNAQ9Y4J8 743 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 SSU72P8A0A1W2PR75 194 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 ARHGEF9O43307 516 aa6.19□□□□□ -1.42
HDAC9-203ENST00000406072 DEAF1O75398 565 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms