RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 MTG1Q9BT17 334 aaPredicted RBP27.61■■■□□ 2.01
CPNE1-205ENST00000401607 GCOM2Q9BZD3 368 aaPredicted RBP27.61■■■□□ 2.01
CPNE1-205ENST00000401607 MTMR12Q9C0I1 747 aa27.61■■■□□ 2.01
CPNE1-205ENST00000401607 GINS2Q9Y248 185 aa27.61■■■□□ 2.01
CPNE1-205ENST00000401607 A0A1B0GUA9 196 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 CTIFO43310 598 aaKnown RBP27.6■■■□□ 2.01
CPNE1-205ENST00000401607 B4GALT4O60513 344 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 MOCS3O95396 460 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 STAG3L1P0CL83 205 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 RARBP10826 455 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 CCND3P30281 292 aaPredicted RBP27.6■■■□□ 2.01
CPNE1-205ENST00000401607 DNAAF5Q86Y56 855 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 C7orf31Q8N865 590 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 U2AF1L4Q8WU68 220 aaKnown RBP27.6■■■□□ 2.01
CPNE1-205ENST00000401607 FAM81BQ96LP2 452 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 OSMRQ99650 979 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 AGPAT1Q99943 283 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 RPF1Q9H9Y2 349 aaKnown RBP27.6■■■□□ 2.01
CPNE1-205ENST00000401607 SRRDQ9UH36 339 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 CYP26A1O43174 497 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 ADAMTS4O75173 837 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 SLU7O95391 586 aaKnown RBP27.6■■■□□ 2.01
CPNE1-205ENST00000401607 SGPL1O95470 568 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 NCOA4Q13772 614 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 TRAPPC11Q7Z392 1133 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 ARID3AQ99856 593 aa27.6■■■□□ 2.01
CPNE1-205ENST00000401607 TRIP12Q14669 1992 aaPredicted RBP27.6■■■□□ 2.01
CPNE1-205ENST00000401607 PHACTR2O75167 634 aa27.59■■■□□ 2.01
CPNE1-205ENST00000401607 CLTAP09496 248 aa27.59■■■□□ 2.01
CPNE1-205ENST00000401607 PRKAR2AP13861 404 aaKnown RBP27.59■■■□□ 2.01
CPNE1-205ENST00000401607 DUOXA2Q1HG44 320 aa27.59■■■□□ 2.01
CPNE1-205ENST00000401607 CXCL17Q6UXB2 119 aa27.59■■■□□ 2.01
CPNE1-205ENST00000401607 EPS8L1Q8TE68 723 aa27.59■■■□□ 2.01
CPNE1-205ENST00000401607 NOCTQ9UK39 431 aaKnown RBP27.59■■■□□ 2.01
CPNE1-205ENST00000401607 SCN10AQ9Y5Y9 1956 aa27.59■■■□□ 2.01
CPNE1-205ENST00000401607 IL18RAPO95256 599 aa27.58■■■□□ 2.01
CPNE1-205ENST00000401607 CST3P01034 146 aaPredicted RBP27.58■■■□□ 2.01
CPNE1-205ENST00000401607 DARSP14868 501 aaKnown RBP27.58■■■□□ 2.01
CPNE1-205ENST00000401607 TNFAIP3P21580 790 aa27.58■■■□□ 2.01
CPNE1-205ENST00000401607 NOP9Q86U38 636 aaKnown RBP27.58■■■□□ 2.01
CPNE1-205ENST00000401607 PALB2Q86YC2 1186 aa27.58■■■□□ 2.01
CPNE1-205ENST00000401607 RNF10Q8N5U6 811 aaKnown RBP27.58■■■□□ 2.01
CPNE1-205ENST00000401607 SPC25Q9HBM1 224 aa27.58■■■□□ 2.01
CPNE1-205ENST00000401607 TACC1O75410 805 aa27.58■■■□□ 2
CPNE1-205ENST00000401607 GNAT1P11488 350 aa27.58■■■□□ 2
CPNE1-205ENST00000401607 MAP2K2P36507 400 aa27.58■■■□□ 2
CPNE1-205ENST00000401607 VEGFBP49765 207 aa27.58■■■□□ 2
CPNE1-205ENST00000401607 NOP14P78316 857 aaKnown RBP27.58■■■□□ 2
CPNE1-205ENST00000401607 AMPD2Q01433 879 aa27.58■■■□□ 2
CPNE1-205ENST00000401607 POU5F1Q01860 360 aaKnown RBP27.58■■■□□ 2
CPNE1-205ENST00000401607 SLC47A2Q86VL8 602 aa27.58■■■□□ 2
CPNE1-205ENST00000401607 ZNF784Q8NCA9 323 aaPredicted RBP27.58■■■□□ 2
CPNE1-205ENST00000401607 LRRN4CLQ8ND94 238 aa27.58■■■□□ 2
CPNE1-205ENST00000401607 TRIM58Q8NG06 486 aa27.58■■■□□ 2
CPNE1-205ENST00000401607 ACP6Q9NPH0 428 aa27.58■■■□□ 2
CPNE1-205ENST00000401607 NUB1Q9Y5A7 615 aa27.58■■■□□ 2
CPNE1-205ENST00000401607 BTNL10A8MVZ5 291 aa27.57■■■□□ 2
CPNE1-205ENST00000401607 BUB1O43683 1085 aa27.57■■■□□ 2
CPNE1-205ENST00000401607 CHRNB2P17787 502 aa27.57■■■□□ 2
CPNE1-205ENST00000401607 HOXA11P31270 313 aaPredicted RBP27.57■■■□□ 2
CPNE1-205ENST00000401607 TFAMQ00059 246 aaKnown RBP27.57■■■□□ 2
CPNE1-205ENST00000401607 TSC1Q92574 1164 aa27.57■■■□□ 2
CPNE1-205ENST00000401607 XPNPEP3Q9NQH7 507 aa27.57■■■□□ 2
CPNE1-205ENST00000401607 UMODL1Q5DID0 1318 aa27.57■■■□□ 2
CPNE1-205ENST00000401607 ENC1O14682 589 aa27.56■■■□□ 2
CPNE1-205ENST00000401607 ASS1P00966 412 aaKnown RBP27.56■■■□□ 2
CPNE1-205ENST00000401607 ATP1A1P05023 1023 aaKnown RBP27.56■■■□□ 2
CPNE1-205ENST00000401607 TMEM191BP0C7N4 346 aa27.56■■■□□ 2
CPNE1-205ENST00000401607 CUL2Q13617 745 aa27.56■■■□□ 2
CPNE1-205ENST00000401607 CATSPER4Q7RTX7 472 aa27.56■■■□□ 2
CPNE1-205ENST00000401607 RPUSD2Q8IZ73 545 aaKnown RBP27.56■■■□□ 2
CPNE1-205ENST00000401607 TMEM40Q8WWA1 233 aa27.56■■■□□ 2
CPNE1-205ENST00000401607 INTUQ9ULD6 942 aa27.56■■■□□ 2
CPNE1-205ENST00000401607 LACTBL1A8MY62 500 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 H2AFZP0C0S5 128 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 CYP11B1P15538 503 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 ACO1P21399 889 aaKnown RBP27.55■■■□□ 2
CPNE1-205ENST00000401607 KYAT1Q16773 422 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 NBPF20Q3BBV1 942 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 H2AFVQ71UI9 128 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 NOX5Q96PH1 765 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 ADPGKQ9BRR6 497 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 CDC23Q9UJX2 597 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 THSD7BQ9C0I4 1608 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 NFICP08651 508 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 EIF4BP23588 611 aaKnown RBP27.55■■■□□ 2
CPNE1-205ENST00000401607 HOXD10P28358 340 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 MYL6P60660 151 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 SNX17Q15036 470 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 PCBP1Q15365 356 aaKnown RBP eCLIP27.55■■■□□ 21e-8■■■■■ 43
CPNE1-205ENST00000401607 SLC10A6Q3KNW5 377 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 KLHDC9Q8NEP7 349 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 ANKRD36BP1Q96IX9 119 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 SEPT11Q9NVA2 429 aaKnown RBP27.55■■■□□ 2
CPNE1-205ENST00000401607 TAS2R14Q9NYV8 317 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 GTF2IRD1Q9UHL9 959 aa27.55■■■□□ 2
CPNE1-205ENST00000401607 ANO9A1A5B4 782 aa27.54■■■□□ 2
CPNE1-205ENST00000401607 TNNC2P02585 160 aa27.54■■■□□ 2
CPNE1-205ENST00000401607 KRT5P13647 590 aa27.54■■■□□ 2
CPNE1-205ENST00000401607 MAP3K21Q5TCX8 1036 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms