RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 CPNE8Q86YQ8 564 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 SHC3Q92529 594 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 GRAMD1AQ96CP6 724 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 KLHL29Q96CT2 875 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 MAGEB18Q96M61 343 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 WDR11Q9BZH6 1224 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 EURLQ9NYK6 297 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 NEU2Q9Y3R4 380 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 LOXHD1Q8IVV2 1947 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 SPOPO43791 374 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 HIP1RO75146 1068 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 IBSPP21815 317 aaPredicted RBP14.22□□□□□ -0.13
TRIM40-207ENST00000396581 CHKAP35790 457 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 SF3A3Q12874 501 aaKnown RBP eCLIP14.22□□□□□ -0.13
TRIM40-207ENST00000396581 ANKLE1Q8NAG6 615 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 RDH13Q8NBN7 331 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 SNF8Q96H20 258 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 KREMEN1Q96MU8 473 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 POP1Q99575 1024 aaKnown RBP14.22□□□□□ -0.13
TRIM40-207ENST00000396581 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 CCDC189A1A4V9 331 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 ATMINO43313 823 aaPredicted RBP14.21□□□□□ -0.13
TRIM40-207ENST00000396581 SORBS3O60504 671 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 PLA2G6O60733 806 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 ACSL3O95573 720 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 MSH2P43246 934 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 STAT2P52630 851 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 SNRPFP62306 86 aaKnown RBP14.21□□□□□ -0.13
TRIM40-207ENST00000396581 MGAT5Q09328 741 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 MKRN4PQ13434 485 aaPredicted RBP14.21□□□□□ -0.13
TRIM40-207ENST00000396581 MTFR1Q15390 333 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 SLC30A10Q6XR72 485 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 CCDC25Q86WR0 208 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 SYCP3Q8IZU3 236 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 PLEKHO2Q8TD55 490 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 MAIP1Q8WWC4 291 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 KAT5Q92993 513 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 FAM212AQ96EL1 285 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 ZNF570Q96NI8 536 aa14.21□□□□□ -0.13
TRIM40-207ENST00000396581 CHORDC1Q9UHD1 332 aaPredicted RBP14.21□□□□□ -0.13
TRIM40-207ENST00000396581 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.13
TRIM40-207ENST00000396581 CHMP2AO43633 222 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 GAS7O60861 476 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 BRAFP15056 766 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 TAL1P17542 331 aaPredicted RBP14.21□□□□□ -0.14
TRIM40-207ENST00000396581 GCLMP48507 274 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 CDR2Q01850 454 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 TRAF1Q13077 416 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 SGO2Q562F6 1265 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 ARHGEF18Q6ZSZ5 1173 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 OTUD6AQ7L8S5 288 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 APOBEC3FQ8IUX4 373 aaKnown RBP14.21□□□□□ -0.14
TRIM40-207ENST00000396581 THOC1Q96FV9 657 aaKnown RBP14.21□□□□□ -0.14
TRIM40-207ENST00000396581 BTBD6Q96KE9 485 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 ANKRD27Q96NW4 1050 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 TMEM117Q9H0C3 514 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 UNC45AQ9H3U1 944 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 ST6GALNAC4Q9H4F1 302 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 SLC5A4Q9NY91 659 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.21□□□□□ -0.14
TRIM40-207ENST00000396581 CTNNAL1Q9UBT7 734 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 GGT7Q9UJ14 662 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 PNMA3Q9UL41 463 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 PRR12Q9ULL5 1215 aa14.21□□□□□ -0.14
TRIM40-207ENST00000396581 FAM170AA1A519 330 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 MAGEB2O15479 319 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 CLDN3O15551 220 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 GRIN3BO60391 1043 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 UNC5CO95185 931 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 IKQ13123 557 aaPredicted RBP14.2□□□□□ -0.14
TRIM40-207ENST00000396581 CEP55Q53EZ4 464 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 NBPF12Q5TAG4 269 aaPredicted RBP14.2□□□□□ -0.14
TRIM40-207ENST00000396581 BZW1Q7L1Q6 419 aaKnown RBP14.2□□□□□ -0.14
TRIM40-207ENST00000396581 SLC47A2Q86VL8 602 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 XXYLT1Q8NBI6 393 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 TRPM4Q8TD43 1214 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 MGARPQ8TDB4 240 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 GRK7Q8WTQ7 553 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 DDX1Q92499 740 aaKnown RBP14.2□□□□□ -0.14
TRIM40-207ENST00000396581 ZNF653Q96CK0 615 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 RMDN2Q96LZ7 410 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 TRAIPQ9BWF2 469 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 GLIS2Q9BZE0 524 aaPredicted RBP14.2□□□□□ -0.14
TRIM40-207ENST00000396581 NINJ2Q9NZG7 142 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 ADAM22Q9P0K1 906 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 COQ4Q9Y3A0 265 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 SBF1O95248 1867 aa14.2□□□□□ -0.14
TRIM40-207ENST00000396581 ARHGEF35A5YM69 484 aa14.19□□□□□ -0.14
TRIM40-207ENST00000396581 K7ENM7 598 aa14.19□□□□□ -0.14
TRIM40-207ENST00000396581 LIN7AO14910 233 aaPredicted RBP14.19□□□□□ -0.14
TRIM40-207ENST00000396581 CDH16O75309 829 aa14.19□□□□□ -0.14
TRIM40-207ENST00000396581 GH1P01241 217 aa14.19□□□□□ -0.14
TRIM40-207ENST00000396581 DLATP10515 647 aaKnown RBP14.19□□□□□ -0.14
TRIM40-207ENST00000396581 CYP11B1P15538 503 aa14.19□□□□□ -0.14
TRIM40-207ENST00000396581 ITGA8P53708 1063 aa14.19□□□□□ -0.14
TRIM40-207ENST00000396581 MAP2K1Q02750 393 aaPredicted RBP14.19□□□□□ -0.14
TRIM40-207ENST00000396581 NAA25Q14CX7 972 aa14.19□□□□□ -0.14
TRIM40-207ENST00000396581 PARP6Q2NL67 630 aa14.19□□□□□ -0.14
TRIM40-207ENST00000396581 TMEM63BQ5T3F8 832 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms