RNA–Protein interactions for RNA: ENST00000378603.7

DDB2-204, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene DDB2, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-204ENST00000378603 C2CD2Q9Y426 696 aa12.36□□□□□ -0.43
DDB2-204ENST00000378603 IRAK3Q9Y616 596 aa12.36□□□□□ -0.43
DDB2-204ENST00000378603 TGFB1I1O43294 461 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 TRAPPC3O43617 180 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 TADA2AO75478 443 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 HOXD13P35453 343 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 PBX3P40426 434 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 TNFSF9P41273 254 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 PNOCQ13519 176 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 CAMK1Q14012 370 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 SMC1AQ14683 1233 aaKnown RBP12.35□□□□□ -0.43
DDB2-204ENST00000378603 ZBTB6Q15916 424 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 UPP1Q16831 310 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 SEZ6Q53EL9 994 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 ZNF658Q5TYW1 1059 aaPredicted RBP12.35□□□□□ -0.43
DDB2-204ENST00000378603 PDXDC1Q6P996 788 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 TMC7Q7Z402 723 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 RNF168Q8IYW5 571 aaPredicted RBP12.35□□□□□ -0.43
DDB2-204ENST00000378603 VPS52Q8N1B4 723 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 XXYLT1Q8NBI6 393 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 GLIS3Q8NEA6 775 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 TCF25Q9BQ70 676 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 AGPAT3Q9NRZ7 376 aa12.35□□□□□ -0.43
DDB2-204ENST00000378603 SF3B1O75533 1304 aaKnown RBP eCLIP12.35□□□□□ -0.43
DDB2-204ENST00000378603 ZNF233A6NK53 670 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 LACTBL1A8MY62 500 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 TISP43B9A030 160 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 FSCN2O14926 492 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 CALUO43852 315 aaPredicted RBP12.34□□□□□ -0.43
DDB2-204ENST00000378603 B4GALT3O60512 393 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 EFEMP2O95967 443 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 SOD2P04179 222 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 CTSAP10619 480 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 DNAJB1P25685 340 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 LRPAP1P30533 357 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 ACOT2P49753 483 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 CLCNKBP51801 687 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 NFIL3Q16649 462 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 GLRA4Q5JXX5 417 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 CRELD2Q6UXH1 353 aaPredicted RBP12.34□□□□□ -0.43
DDB2-204ENST00000378603 SLC9A9Q8IVB4 645 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 BRSK2Q8IWQ3 736 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 NELFCDQ8IXH7 590 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 MRPL43Q8N983 215 aaKnown RBP12.34□□□□□ -0.43
DDB2-204ENST00000378603 BEST2Q8NFU1 509 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 CACTINQ8WUQ7 758 aaKnown RBP12.34□□□□□ -0.43
DDB2-204ENST00000378603 KIF12Q96FN5 646 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 ZMAT2Q96NC0 199 aaKnown RBP12.34□□□□□ -0.43
DDB2-204ENST00000378603 CBWD1Q9BRT8 395 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 FAM213AQ9BRX8 229 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 HERC2P3Q9BVR0 1158 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 ZBP1Q9H171 429 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 MARCH5Q9NX47 278 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 RBAKQ9NYW8 714 aaPredicted RBP12.34□□□□□ -0.43
DDB2-204ENST00000378603 HSPBP1Q9NZL4 362 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 COG5Q9UP83 839 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 TRAF3IP3Q9Y228 551 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 PRG3Q9Y2Y8 225 aaPredicted RBP12.34□□□□□ -0.43
DDB2-204ENST00000378603 PCDHA5Q9Y5H7 936 aa12.34□□□□□ -0.43
DDB2-204ENST00000378603 CASTOR2A6NHX0 329 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 B3GAT3O94766 335 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 C1RP00736 705 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 URODP06132 367 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 ERVFC1P60507 584 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 CREMQ03060 361 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 STIM1Q13586 685 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 TMEM132DQ14C87 1099 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 SPATA1Q5VX52 437 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 FUT10Q6P4F1 479 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 TMEM173Q86WV6 379 aaPredicted RBP12.33□□□□□ -0.44
DDB2-204ENST00000378603 MICALL1Q8N3F8 863 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 TRIML1Q8N9V2 468 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 FAM212AQ96EL1 285 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 KCTD10Q9H3F6 313 aa12.33□□□□□ -0.44
DDB2-204ENST00000378603 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.33□□□□□ -0.44
DDB2-204ENST00000378603 MRPL17Q9NRX2 175 aaKnown RBP12.33□□□□□ -0.44
DDB2-204ENST00000378603 MTCL1Q9Y4B5 1905 aaKnown RBP12.33□□□□□ -0.44
DDB2-204ENST00000378603 ARHGEF37A1IGU5 675 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 PODXLO00592 558 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 MAPK13O15264 365 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 MEFVO15553 781 aaPredicted RBP12.32□□□□□ -0.44
DDB2-204ENST00000378603 CXCL14O95715 111 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 SRGAP2BP0DMP2 458 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 RPL13P26373 211 aaKnown RBP12.32□□□□□ -0.44
DDB2-204ENST00000378603 GLUD2P49448 558 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 DSG1Q02413 1049 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 SNRNP35Q16560 246 aaKnown RBP12.32□□□□□ -0.44
DDB2-204ENST00000378603 ZBTB41Q5SVQ8 909 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 JADE1Q6IE81 842 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 KIAA1841Q6NSI8 718 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 USP37Q86T82 979 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 PPFIBP1Q86W92 1011 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 BCL7CQ8WUZ0 217 aaPredicted RBP12.32□□□□□ -0.44
DDB2-204ENST00000378603 PABPC5Q96DU9 382 aaKnown RBP12.32□□□□□ -0.44
DDB2-204ENST00000378603 SAAL1Q96ER3 474 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 EMILIN2Q9BXX0 1053 aa12.32□□□□□ -0.44
DDB2-204ENST00000378603 CXCL16Q9H2A7 254 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms