RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 USP20Q9Y2K6 914 aa16.89■□□□□ 0.29
CKAP4-201ENST00000378026 SMAPO00193 183 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 CAPN9O14815 690 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 EYA4O95677 639 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 KPNB1Q14974 876 aaKnown RBP16.88■□□□□ 0.29
CKAP4-201ENST00000378026 NBPF20Q3BBV1 942 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 EPC2Q52LR7 807 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 WASHC2DQ5SRD0 308 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 ODR4Q5SWX8 454 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 HHATQ5VTY9 493 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 FOXB2Q5VYV0 432 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 ZNF365Q70YC5 407 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 GSTA5Q7RTV2 222 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 TRAIPQ9BWF2 469 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 SNHG28P0DPA3 235 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 PTPN4P29074 926 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 VHLP40337 213 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 GCLCP48506 637 aaPredicted RBP16.88■□□□□ 0.29
CKAP4-201ENST00000378026 RHBDL3P58872 404 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 IZUMO3Q5VZ72 239 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 OR52E8Q6IFG1 317 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 LLGL2Q6P1M3 1020 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 SCYL3Q8IZE3 742 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 RBM15Q96T37 977 aaKnown RBP eCLIP16.88■□□□□ 0.29
CKAP4-201ENST00000378026 PARVGQ9HBI0 331 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 SAYSD1Q9NPB0 183 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 A0A0G2JND7 137 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 MSH4O15457 936 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 EDF1O60869 148 aaKnown RBP16.88■□□□□ 0.29
CKAP4-201ENST00000378026 ZCCHC18P0CG32 403 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 FGFR1P11362 822 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 CACNA2D1P54289 1103 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 HADHBP55084 474 aaKnown RBP16.88■□□□□ 0.29
CKAP4-201ENST00000378026 PPP3CAQ08209 521 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 C4orf50Q6ZRC1 276 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 OTOAQ7RTW8 1153 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 ZSWIM2Q8NEG5 633 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 C10orf82Q8WW14 230 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 SETDB2Q96T68 719 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 CADM1Q9BY67 442 aaKnown RBP16.88■□□□□ 0.29
CKAP4-201ENST00000378026 KCNQ5Q9NR82 932 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
CKAP4-201ENST00000378026 MYH14Q7Z406 1995 aaKnown RBP16.87■□□□□ 0.29
CKAP4-201ENST00000378026 KIF13BQ9NQT8 1826 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 A0A1W2PPM1 405 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 PYGLP06737 847 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 SERPINB4P48594 390 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 CERKLQ49MI3 558 aaPredicted RBP16.87■□□□□ 0.29
CKAP4-201ENST00000378026 LMO3Q8TAP4 145 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 FBXO41Q8TF61 875 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 NAP1L4Q99733 375 aaKnown RBP16.87■□□□□ 0.29
CKAP4-201ENST00000378026 ANAPC7Q9UJX3 599 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 SPATA31A1Q5TZJ5 1347 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 MEIS2O14770 477 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 RNF8O76064 485 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 SSR1P43307 286 aaKnown RBP16.87■□□□□ 0.29
CKAP4-201ENST00000378026 MAGEA4P43358 317 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 IKQ13123 557 aaPredicted RBP16.87■□□□□ 0.29
CKAP4-201ENST00000378026 SGSM1Q2NKQ1 1148 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 MFSD14BQ5SR56 506 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 EPS8L1Q8TE68 723 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 MAML1Q92585 1016 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 FAM136AQ96C01 138 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 DYDC2Q96IM9 177 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 SMC6Q96SB8 1091 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 EPAS1Q99814 870 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 VPS37BQ9H9H4 285 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 KIAA1586Q9HCI6 787 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 OLFML3Q9NRN5 406 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 LGALS13Q9UHV8 139 aa16.87■□□□□ 0.29
CKAP4-201ENST00000378026 FSCN2O14926 492 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 KCNQ2O43526 872 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 SKIP12755 728 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 RANBP1P43487 201 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 STAT4Q14765 748 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 FASTKD3Q14CZ7 662 aaKnown RBP16.86■□□□□ 0.29
CKAP4-201ENST00000378026 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
CKAP4-201ENST00000378026 PLEKHG4Q58EX7 1191 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 ACSBG2Q5FVE4 666 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 IRGCQ6NXR0 463 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 TRABD2AQ86V40 505 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 C12orf50Q8NA57 414 aaPredicted RBP16.86■□□□□ 0.29
CKAP4-201ENST00000378026 PSPC1Q8WXF1 523 aaKnown RBP16.86■□□□□ 0.29
CKAP4-201ENST00000378026 PCMTD2Q9NV79 361 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 DDX60LQ5H9U9 1706 aaKnown RBP16.86■□□□□ 0.29
CKAP4-201ENST00000378026 MTM1Q13496 603 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 MTHFD1LQ6UB35 978 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 ZNF720Q7Z2F6 126 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 MCUR1Q96AQ8 359 aa16.86■□□□□ 0.29
CKAP4-201ENST00000378026 PTK6Q13882 451 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 LVRNQ6Q4G3 990 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 VPS52Q8N1B4 723 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 B4GALNT2Q8NHY0 566 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 RFWD2Q8NHY2 731 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 LENG9Q96B70 501 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 PRR11Q96HE9 360 aaPredicted RBP16.85■□□□□ 0.29
CKAP4-201ENST00000378026 KLF6Q99612 283 aaPredicted RBP16.85■□□□□ 0.29
CKAP4-201ENST00000378026 DCLK3Q9C098 648 aa16.85■□□□□ 0.29
CKAP4-201ENST00000378026 G3BP2Q9UN86 482 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms