RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ZNF564Q8TBZ8 553 aaPredicted RBP11.85□□□□□ -0.51
CCDC40-203ENST00000374877 CKAP2Q8WWK9 683 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 CRYGNQ8WXF5 182 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 KAT5Q92993 513 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 NUP85Q9BW27 656 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 ETNK1Q9HBU6 452 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 WDR90Q96KV7 1748 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 THAP12O43422 761 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 ATP2A2P16615 1042 aaKnown RBP11.84□□□□□ -0.51
CCDC40-203ENST00000374877 EPHX2P34913 555 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 SREBF1P36956 1147 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 GCLMP48507 274 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 HADHBP55084 474 aaKnown RBP11.84□□□□□ -0.51
CCDC40-203ENST00000374877 MPP2Q14168 576 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 FAM47EQ6ZV65 393 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 C1orf186Q6ZWK4 172 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 MAEAQ7L5Y9 396 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 ZNF720Q7Z2F6 126 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 FBXO11Q86XK2 927 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 SRRM1Q8IYB3 904 aaKnown RBP11.84□□□□□ -0.51
CCDC40-203ENST00000374877 ACER1Q8TDN7 264 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 FAM167BQ9BTA0 163 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 TRIM7Q9C029 511 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 ARHGEF3Q9NR81 526 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 AAASQ9NRG9 546 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 STK24Q9Y6E0 443 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 O00370 1275 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 CCNHP51946 323 aaPredicted RBP11.84□□□□□ -0.51
CCDC40-203ENST00000374877 CETN1Q12798 172 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 SULF1Q8IWU6 871 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 ATG4AQ8WYN0 398 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 ZNF653Q96CK0 615 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 PWWP2AQ96N64 755 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 PCDHB18PQ96TA0 734 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 WDR18Q9BV38 432 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 NKIRAS1Q9NYS0 192 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 ADAM22Q9P0K1 906 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 SCN4AP35499 1836 aa11.84□□□□□ -0.51
CCDC40-203ENST00000374877 GJB6O95452 261 aa11.83□□□□□ -0.51
CCDC40-203ENST00000374877 SGPL1O95470 568 aa11.83□□□□□ -0.51
CCDC40-203ENST00000374877 RWDD2BP57060 319 aa11.83□□□□□ -0.51
CCDC40-203ENST00000374877 CYP1B1Q16678 543 aa11.83□□□□□ -0.51
CCDC40-203ENST00000374877 ANKRD20A2Q5SQ80 823 aa11.83□□□□□ -0.51
CCDC40-203ENST00000374877 ANKRD20A1Q5TYW2 823 aa11.83□□□□□ -0.51
CCDC40-203ENST00000374877 ANKRD20A3Q5VUR7 823 aa11.83□□□□□ -0.51
CCDC40-203ENST00000374877 PLCD4Q9BRC7 762 aa11.83□□□□□ -0.51
CCDC40-203ENST00000374877 KIAA1683Q9H0B3 1180 aa11.83□□□□□ -0.51
CCDC40-203ENST00000374877 SCAF8Q9UPN6 1271 aaKnown RBP11.83□□□□□ -0.51
CCDC40-203ENST00000374877 ECE1P42892 770 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 SIX1Q15475 284 aaPredicted RBP11.83□□□□□ -0.52
CCDC40-203ENST00000374877 CAPRIN2Q6IMN6 1127 aaKnown RBP11.83□□□□□ -0.52
CCDC40-203ENST00000374877 LPAR1Q92633 364 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 AS3MTQ9HBK9 375 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 SLC5A4Q9NY91 659 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 DOCK1Q14185 1865 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 TISP43B9A030 160 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 SLITRK3O94933 977 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 FOSP01100 380 aaPredicted RBP11.83□□□□□ -0.52
CCDC40-203ENST00000374877 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 INTS8Q75QN2 995 aaKnown RBP11.83□□□□□ -0.52
CCDC40-203ENST00000374877 FAM160B2Q86V87 743 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 CYP4X1Q8N118 509 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 LMO3Q8TAP4 145 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 FBF1Q8TES7 1133 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 KLRG1Q96E93 195 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 DMAC2Q9NW81 257 aa11.83□□□□□ -0.52
CCDC40-203ENST00000374877 PPP1R12AO14974 1030 aaPredicted RBP11.82□□□□□ -0.52
CCDC40-203ENST00000374877 TTC4O95801 387 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 RFX1P22670 979 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 ITGA8P53708 1063 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 SATB1Q01826 763 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 TRAF1Q13077 416 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 TAF11Q15544 211 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 NFIL3Q16649 462 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 TRIM68Q6AZZ1 485 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 NOP9Q86U38 636 aaKnown RBP11.82□□□□□ -0.52
CCDC40-203ENST00000374877 PPM1KQ8N3J5 372 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 CD101Q93033 1021 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 FIZ1Q96SL8 496 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 HSD17B14Q9BPX1 270 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 PITPNM3Q9BZ71 974 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 CYP26A1O43174 497 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 UBXN2AP68543 259 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 PPP3CAQ08209 521 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 MGAT5Q09328 741 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 ARHGEF18Q6ZSZ5 1173 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 ASRGL1Q7L266 308 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 VSIG1Q86XK7 387 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 ECHDC2Q86YB7 292 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 SLC17A8Q8NDX2 589 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 CHST7Q9NS84 486 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 WHRNQ9P202 907 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC40-203ENST00000374877 GSTTP1A0A1W2PQM5 241 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 K7ENM7 598 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 ADCY8P40145 1251 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 CGB2Q6NT52 195 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 EPS8L1Q8TE68 723 aa11.82□□□□□ -0.52
CCDC40-203ENST00000374877 CHURC1Q8WUH1 139 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms