RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 PCDHA5Q9Y5H7 936 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 MYO7AQ13402 2215 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 FSCN2O14926 492 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 ADRB2P07550 413 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 CLCNKBP51801 687 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 HSP90AA2PQ14568 343 aaPredicted RBP16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 KNOP1Q1ED39 458 aaKnown RBP16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 TIGD5Q53EQ6 642 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 PLPP4Q5VZY2 271 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 DDX53Q86TM3 631 aaKnown RBP16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 SMYD4Q8IYR2 804 aaPredicted RBP16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 AUTS2Q8WXX7 1259 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 CCDC47Q96A33 483 aaKnown RBP16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 TCF25Q9BQ70 676 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 ZBP1Q9H171 429 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 NSUN3Q9H649 340 aaKnown RBP16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 PLEKHA5Q9HAU0 1116 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 MAPK8IP1Q9UQF2 711 aa16.4■□□□□ 0.22
SMPDL3A-201ENST00000368440 EFEMP2O95967 443 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 GTF2F1P35269 517 aaKnown RBP eCLIP16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 JADE1Q6IE81 842 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 TAS1R1Q7RTX1 841 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 VPS52Q8N1B4 723 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 C3orf58Q8NDZ4 430 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 SPATA20Q8TB22 786 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 KIF12Q96FN5 646 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 COLEC11Q9BWP8 271 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 KCTD10Q9H3F6 313 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 PRDM6Q9NQX0 595 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 ENTPD7Q9NQZ7 604 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 HSPBP1Q9NZL4 362 aa16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 PUF60Q9UHX1 559 aaKnown RBP16.39■□□□□ 0.22
SMPDL3A-201ENST00000368440 VWA8A3KMH1 1905 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 CARNS1A5YM72 827 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 HIDE1A8MVS5 230 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 NFICP08651 508 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 PTMSP20962 102 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 GUCY2FP51841 1108 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 ZBTB6Q15916 424 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 CD300LGQ6UXG3 332 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 TMC7Q7Z402 723 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 RNF168Q8IYW5 571 aaPredicted RBP16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 GPD1LQ8N335 351 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 MICAL1Q8TDZ2 1067 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 GPR62Q9BZJ7 368 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 ADAM28Q9UKQ2 775 aa16.39■□□□□ 0.21
SMPDL3A-201ENST00000368440 EXTL3O43909 919 aa16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 CYP2J2P51589 502 aa16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 UPP1Q16831 310 aa16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 FUT10Q6P4F1 479 aa16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 BRSK2Q8IWQ3 736 aa16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 ELOA2Q8IYF1 753 aaPredicted RBP16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 SMARCE1Q969G3 411 aa16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 FAM84AQ96KN4 292 aa16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 B3GALT6Q96L58 329 aa16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 SLC38A7Q9NVC3 462 aa16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 XIRP2A4UGR9 3374 aa16.38■□□□□ 0.21
SMPDL3A-201ENST00000368440 SMC2O95347 1197 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 LDHAP00338 332 aaKnown RBP16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 HYAL1Q12794 435 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 ISM2Q6H9L7 571 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 HS2ST1Q7LGA3 356 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 RBM23Q86U06 439 aaKnown RBP16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 CBWD2Q8IUF1 395 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 EFCAB13Q8IY85 973 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 GSDMAQ96QA5 445 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 HERC2P3Q9BVR0 1158 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 RBAKQ9NYW8 714 aaPredicted RBP16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 HOOK1Q9UJC3 728 aaKnown RBP16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 PODXLO00592 558 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 PER2O15055 1255 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 TADA2AO75478 443 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 CTSAP10619 480 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 SKIV2LQ15477 1246 aaKnown RBP16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 CAMK4Q16566 473 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 CD302Q8IX05 232 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 UROC1Q96N76 676 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 RMND1Q9NWS8 449 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 MAN1B1Q9UKM7 699 aa16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 UBQLN1Q9UMX0 589 aaKnown RBP16.37■□□□□ 0.21
SMPDL3A-201ENST00000368440 I3L4J1 428 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 TULP1O00294 542 aaPredicted RBP16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 SOD2P04179 222 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 CA8P35219 290 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 NRIP1P48552 1158 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 SMC1AQ14683 1233 aaKnown RBP16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 TMEM132DQ14C87 1099 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 PTPN14Q15678 1187 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 ZNF658Q5TYW1 1059 aaPredicted RBP16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 C12orf56Q8IXR9 622 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 GUF1Q8N442 669 aaKnown RBP16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 RDH13Q8NBN7 331 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 FBXL18Q96ME1 805 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 IGFLR1Q9H665 355 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 ASB7Q9H672 318 aa16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 NGRNQ9NPE2 291 aaKnown RBP16.36■□□□□ 0.21
SMPDL3A-201ENST00000368440 C2orf71A6NGG8 1288 aa16.35■□□□□ 0.21
SMPDL3A-201ENST00000368440 TMEM189-UBE2V1I3L0A0 370 aa16.35■□□□□ 0.21
SMPDL3A-201ENST00000368440 PPEF2O14830 753 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms