RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ZNF507Q8TCN5 953 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 POMGNT1Q8WZA1 660 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 HERC2P3Q9BVR0 1158 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 PLEKHA5Q9HAU0 1116 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 CLDND1Q9NY35 253 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 AGO2Q9UKV8 859 aaKnown RBP24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 LACTBL1A8MY62 500 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 NCK2O43639 380 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 LILRB3O75022 631 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 TBX10O75333 385 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 ACOT2P49753 483 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 CLCNKBP51801 687 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 RBM10P98175 930 aaKnown RBP24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 KCNC3Q14003 757 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 PTPN14Q15678 1187 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 ZBTB6Q15916 424 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 UPP1Q16831 310 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 SYCP3Q8IZU3 236 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 TMEM130Q8N3G9 435 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 ZSWIM2Q8NEG5 633 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 ENGASEQ8NFI3 743 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 VN1R2Q8NFZ6 395 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 HASPINQ8TF76 798 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 C18orf25Q96B23 403 aaPredicted RBP24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 TMEM206Q9H813 350 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 RPF1Q9H9Y2 349 aaKnown RBP24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 SLC39A2Q9NP94 309 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 STK39Q9UEW8 545 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 PLXNA3P51805 1871 aa24.44■■□□□ 1.5
ECHDC1-203ENST00000368291 MYL1P05976 194 aa24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 KCNA5P22460 613 aa24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 MRPS5P82675 430 aaKnown RBP24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 SPAG1Q07617 926 aa24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 SNW1Q13573 536 aaKnown RBP24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 POSTNQ15063 836 aa24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 KMT5BQ4FZB7 885 aa24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 C3orf58Q8NDZ4 430 aa24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 SCFD1Q8WVM8 642 aa24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 ASB2Q96Q27 587 aa24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 CDCA3Q99618 268 aaPredicted RBP24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 CHST7Q9NS84 486 aa24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 SLC38A7Q9NVC3 462 aa24.43■■□□□ 1.5
ECHDC1-203ENST00000368291 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 TMEM189-UBE2V1I3L0A0 370 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 TADA2AO75478 443 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 GARTP22102 1010 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 DPYDQ12882 1025 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 STXBP4Q6ZWJ1 553 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 UROC1Q96N76 676 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 CBWD1Q9BRT8 395 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 MTCL1Q9Y4B5 1905 aaKnown RBP24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 H3BQ06 376 aaPredicted RBP24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 KCNQ1P51787 676 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 PPP2R3AQ06190 1150 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 BMS1Q14692 1282 aaKnown RBP24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 KIAA0319Q5VV43 1072 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 DCLRE1AQ6PJP8 1040 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 EP400NLQ6ZTU2 488 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 KIAA0895Q8NCT3 520 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 B3GALT6Q96L58 329 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 CLEC1BQ9P126 229 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 TUBGCP4Q9UGJ1 667 aa24.42■■□□□ 1.5
ECHDC1-203ENST00000368291 A0A0C4DFX4 3053 aa24.41■■□□□ 1.5
ECHDC1-203ENST00000368291 GOLGA6L4A6NEF3 574 aa24.41■■□□□ 1.5
ECHDC1-203ENST00000368291 TGFB1I1O43294 461 aa24.41■■□□□ 1.5
ECHDC1-203ENST00000368291 CLASP2O75122 1294 aaKnown RBP24.41■■□□□ 1.5
ECHDC1-203ENST00000368291 DSG1Q02413 1049 aa24.41■■□□□ 1.5
ECHDC1-203ENST00000368291 STK4Q13043 487 aa24.41■■□□□ 1.5
ECHDC1-203ENST00000368291 BMT2Q1RMZ1 405 aa24.41■■□□□ 1.5
ECHDC1-203ENST00000368291 LEXMQ3ZCV2 418 aa24.41■■□□□ 1.5
ECHDC1-203ENST00000368291 SAAL1Q96ER3 474 aa24.41■■□□□ 1.5
ECHDC1-203ENST00000368291 KIF12Q96FN5 646 aa24.41■■□□□ 1.5
ECHDC1-203ENST00000368291 SCN1AP35498 2009 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 SF3B1O75533 1304 aaKnown RBP eCLIP24.4■■□□□ 1.58e-6■■■■■ 107
ECHDC1-203ENST00000368291 UBE4BO95155 1302 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 C2CD2LO14523 706 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 GADD45BO75293 160 aaPredicted RBP24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 B3GAT3O94766 335 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 RPN1P04843 607 aaKnown RBP24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 CA8P35219 290 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 GLUD2P49448 558 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 WNT7BP56706 349 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 POU5F1Q01860 360 aaKnown RBP24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 TMEM184AQ6ZMB5 413 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 DDX27Q96GQ7 796 aaKnown RBP24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 MSLNLQ96KJ4 702 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 PCIF1Q9H4Z3 704 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 MRPL17Q9NRX2 175 aaKnown RBP24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 EXOC1Q9NV70 894 aa24.4■■□□□ 1.5
ECHDC1-203ENST00000368291 VCANP13611 3396 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 PODXLO00592 558 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 URODP06132 367 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 CNPP09543 421 aaKnown RBP24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 BMP1P13497 986 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 FAM160A1Q05DH4 1040 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 PSMD2Q13200 908 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 AAK1Q2M2I8 961 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 USP41Q3LFD5 358 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 JADE1Q6IE81 842 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms