RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 PLEKHG4BQ96PX9 1271 aa5.63□□□□□ -1.51
CNIH4-201ENST00000366856 MPHOSPH6Q99547 160 aaKnown RBP5.63□□□□□ -1.51
CNIH4-201ENST00000366856 GOLGA6AQ9NYA3 693 aa5.63□□□□□ -1.51
CNIH4-201ENST00000366856 TCRBV7S2A1N4TA0A589 114 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 LRRC14BA6NHZ5 514 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 TBKBP1A7MCY6 615 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 SCAF4O95104 1147 aaKnown RBP5.62□□□□□ -1.51
CNIH4-201ENST00000366856 RPLP2P05387 115 aaKnown RBP5.62□□□□□ -1.51
CNIH4-201ENST00000366856 PDCP20941 246 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 APOBEC3AP31941 199 aaPredicted RBP5.62□□□□□ -1.51
CNIH4-201ENST00000366856 FXR1P51114 621 aaKnown RBP eCLIP5.62□□□□□ -1.51
CNIH4-201ENST00000366856 RABGGTBP53611 331 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 CDC42EP1Q00587 391 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 PUM1Q14671 1186 aaKnown RBP eCLIP5.62□□□□□ -1.51
CNIH4-201ENST00000366856 VPS72Q15906 364 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 ATP2B3Q16720 1220 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 DOK3Q7L591 496 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 OR52N2Q8NGI0 321 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 BORCS6Q96GS4 357 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 ZNF341Q9BYN7 854 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 GTPBP4Q9BZE4 634 aaKnown RBP5.62□□□□□ -1.51
CNIH4-201ENST00000366856 KCNH6Q9H252 994 aa5.62□□□□□ -1.51
CNIH4-201ENST00000366856 KLRG2A4D1S0 409 aaPredicted RBP5.61□□□□□ -1.51
CNIH4-201ENST00000366856 VSTM5A8MXK1 200 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 TEX33O43247 280 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 ITGB1P05556 798 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 WASP42768 502 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 CHN2P52757 468 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 ZNF280AP59817 542 aaPredicted RBP5.61□□□□□ -1.51
CNIH4-201ENST00000366856 NHLH2Q02577 135 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 MTM1Q13496 603 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 ZNF267Q14586 743 aaPredicted RBP5.61□□□□□ -1.51
CNIH4-201ENST00000366856 BMT2Q1RMZ1 405 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 DCAF17Q5H9S7 520 aaPredicted RBP5.61□□□□□ -1.51
CNIH4-201ENST00000366856 C1QL3Q5VWW1 255 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 CXorf57Q6NSI4 855 aaKnown RBP5.61□□□□□ -1.51
CNIH4-201ENST00000366856 RNF207Q6ZRF8 634 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 MED25Q71SY5 747 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 DGKHQ86XP1 1220 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 IL17DQ8TAD2 202 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 MAP3K14Q99558 947 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 VRK1Q99986 396 aaPredicted RBP5.61□□□□□ -1.51
CNIH4-201ENST00000366856 TCF7L1Q9HCS4 588 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 OBP2AQ9NY56 170 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 TRPM5Q9NZQ8 1165 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.61□□□□□ -1.51
CNIH4-201ENST00000366856 PCDHB1Q9Y5F3 818 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 COMMD10Q9Y6G5 202 aa5.61□□□□□ -1.51
CNIH4-201ENST00000366856 ATRNL1Q5VV63 1379 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 LEFTY2O00292 366 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 AP1G1O43747 822 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 OFD1O75665 1012 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 RPS6KA4O75676 772 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 RECQL4O94761 1208 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 POMCP01189 267 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 FTLP02792 175 aaPredicted RBP5.6□□□□□ -1.51
CNIH4-201ENST00000366856 CD1AP06126 327 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 C1SP09871 688 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 MYBP10242 640 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 VCAM1P19320 739 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 MGAT1P26572 445 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 RNASE9P60153 205 aaKnown RBP5.6□□□□□ -1.51
CNIH4-201ENST00000366856 DGCR2P98153 550 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 OS9Q13438 667 aaPredicted RBP5.6□□□□□ -1.51
CNIH4-201ENST00000366856 BRD3Q15059 726 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 PGS1Q32NB8 556 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 USP45Q70EL2 814 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 TTC7BQ86TV6 843 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 SH2D3CQ8N5H7 860 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 CAMKK1Q8N5S9 505 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 SAMD3Q8N6K7 520 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 CASKIN2Q8WXE0 1202 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 C1QTNF3Q9BXJ4 246 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 C11orf54Q9H0W9 315 aaPredicted RBP5.6□□□□□ -1.51
CNIH4-201ENST00000366856 SLAMF7Q9NQ25 335 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 PARPBPQ9NWS1 579 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 SLC23A1Q9UHI7 598 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 CLCA2Q9UQC9 943 aa5.6□□□□□ -1.51
CNIH4-201ENST00000366856 REXO2Q9Y3B8 237 aaKnown RBP5.6□□□□□ -1.51
CNIH4-201ENST00000366856 USP15Q9Y4E8 981 aaPredicted RBP5.6□□□□□ -1.51
CNIH4-201ENST00000366856 CFAP20Q9Y6A4 193 aaKnown RBP5.6□□□□□ -1.51
CNIH4-201ENST00000366856 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 CDHR4A6H8M9 788 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 PJA2O43164 708 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 LDHAP00338 332 aaKnown RBP5.59□□□□□ -1.51
CNIH4-201ENST00000366856 SLC6A2P23975 617 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 SMARCA1P28370 1054 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 PTTG1IPP53801 180 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 KHDC1Q4VXA5 237 aaKnown RBP5.59□□□□□ -1.51
CNIH4-201ENST00000366856 SYT12Q8IV01 421 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 IFI44Q8TCB0 444 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 RGMAQ96B86 450 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 TIFAQ96CG3 184 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 NDC1Q9BTX1 674 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 ZNF700Q9H0M5 742 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 FBXO34Q9NWN3 711 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 PNMA8BQ9ULN7 279 aaPredicted RBP5.59□□□□□ -1.51
CNIH4-201ENST00000366856 TESMINQ9Y4I5 508 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 PCDHA3Q9Y5H8 950 aa5.59□□□□□ -1.51
CNIH4-201ENST00000366856 XDHP47989 1333 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms