RNA–Protein interactions for RNA: ENST00000360958.6

TPM2-202, Transcript of tropomyosin 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene TPM2, Length 1,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-202ENST00000360958 CDCA3Q99618 268 aaPredicted RBP16.25■□□□□ 0.19
TPM2-202ENST00000360958 ZBP1Q9H171 429 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 IKZF4Q9H2S9 585 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 AGPAT3Q9NRZ7 376 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 ADAM28Q9UKQ2 775 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 C2CD2Q9Y426 696 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.24■□□□□ 0.19
TPM2-202ENST00000360958 XPOTO43592 962 aaKnown RBP16.24■□□□□ 0.19
TPM2-202ENST00000360958 EXTL3O43909 919 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 SMC2O95347 1197 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 SOD2P04179 222 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 CTSAP10619 480 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 PAX3P23760 479 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 ERVFC1P60507 584 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 ELAVL2Q12926 359 aaKnown RBP16.24■□□□□ 0.19
TPM2-202ENST00000360958 MYBPC2Q14324 1141 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 UPP1Q16831 310 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 SEZ6Q53EL9 994 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 DCLRE1AQ6PJP8 1040 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 SLC9A9Q8IVB4 645 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 BRSK2Q8IWQ3 736 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 GUF1Q8N442 669 aaKnown RBP16.24■□□□□ 0.19
TPM2-202ENST00000360958 MRPL43Q8N983 215 aaKnown RBP16.24■□□□□ 0.19
TPM2-202ENST00000360958 GBP4Q96PP9 640 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 CBWD1Q9BRT8 395 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 HERC2P3Q9BVR0 1158 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 VN1R3Q9BXE9 311 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 KCTD10Q9H3F6 313 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 UBQLN1Q9UMX0 589 aaKnown RBP16.24■□□□□ 0.19
TPM2-202ENST00000360958 PRUNE2Q8WUY3 3088 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 TRIP11Q15643 1979 aa16.24■□□□□ 0.19
TPM2-202ENST00000360958 SF3B1O75533 1304 aaKnown RBP eCLIP16.23■□□□□ 0.19
TPM2-202ENST00000360958 LACTBL1A8MY62 500 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 PDXKO00764 312 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 C1RP00736 705 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 LRPAP1P30533 357 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 IRS1P35568 1242 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 ACOT2P49753 483 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 SOX4Q06945 474 aaPredicted RBP16.23■□□□□ 0.19
TPM2-202ENST00000360958 PNOCQ13519 176 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 SMC1AQ14683 1233 aaKnown RBP16.23■□□□□ 0.19
TPM2-202ENST00000360958 NFIL3Q16649 462 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 GLRA4Q5JXX5 417 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 VPS52Q8N1B4 723 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 GPD1LQ8N335 351 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 TCF25Q9BQ70 676 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 CHST7Q9NS84 486 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 TRAF3IP3Q9Y228 551 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 SSX2IPQ9Y2D8 614 aa16.23■□□□□ 0.19
TPM2-202ENST00000360958 PRG3Q9Y2Y8 225 aaPredicted RBP16.23■□□□□ 0.19
TPM2-202ENST00000360958 CASTOR2A6NHX0 329 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 LILRB3O75022 631 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 PRPF40AO75400 957 aaKnown RBP16.22■□□□□ 0.19
TPM2-202ENST00000360958 CTC1Q2NKJ3 1217 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 TPRNQ4KMQ1 711 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 TCEAL5Q5H9L2 206 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 SPATA1Q5VX52 437 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 FUT10Q6P4F1 479 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 TMC7Q7Z402 723 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 SMARCE1Q969G3 411 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 KIF12Q96FN5 646 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 PAAF1Q9BRP4 392 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 FAM213AQ9BRX8 229 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 ENTPD7Q9NQZ7 604 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 DMAC2Q9NW81 257 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 HSPBP1Q9NZL4 362 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 COG5Q9UP83 839 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 PCDHA5Q9Y5H7 936 aa16.22■□□□□ 0.19
TPM2-202ENST00000360958 ANK1P16157 1881 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.21■□□□□ 0.19
TPM2-202ENST00000360958 C2orf71A6NGG8 1288 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 TADA2AO75478 443 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 KIF4AO95239 1232 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 CLCNKBP51801 687 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 DSG1Q02413 1049 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 HYAL1Q12794 435 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 SURF1Q15526 300 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 ZNF658Q5TYW1 1059 aaPredicted RBP16.21■□□□□ 0.19
TPM2-202ENST00000360958 CD300LGQ6UXG3 332 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 NELFCDQ8IXH7 590 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 XXYLT1Q8NBI6 393 aa16.21■□□□□ 0.19
TPM2-202ENST00000360958 PABPC5Q96DU9 382 aaKnown RBP16.21■□□□□ 0.19
TPM2-202ENST00000360958 RBAKQ9NYW8 714 aaPredicted RBP16.21■□□□□ 0.19
TPM2-202ENST00000360958 ZNF233A6NK53 670 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 PODXLO00592 558 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 TRAPPC3O43617 180 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 B3GAT3O94766 335 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 PPP1R2P41236 205 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 CREMQ03060 361 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 KCNC3Q14003 757 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 TMEM132DQ14C87 1099 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 DUSP6Q16828 381 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 USP41Q3LFD5 358 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 KIAA0319Q5VV43 1072 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 JADE1Q6IE81 842 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 PDXDC1Q6P996 788 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 FOXR2Q6PJQ5 311 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 TMEM184AQ6ZMB5 413 aa16.2■□□□□ 0.18
TPM2-202ENST00000360958 EFHBQ8N7U6 833 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms