RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 FAM32AQ9Y421 112 aaKnown RBP12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 N6AMT1Q9Y5N5 214 aa12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 NR3C1P04150 777 aa12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 RCSD1Q6JBY9 416 aa12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 OOSP2Q86WS3 158 aa12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 SLC44A2Q8IWA5 706 aaPredicted RBP12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 NFKBIZQ9BYH8 718 aa12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 ZFYVE1Q9HBF4 777 aa12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 RWDD2AQ9UIY3 292 aa12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 AGAP1Q9UPQ3 857 aa12.9□□□□□ -0.34
TRIOBP-202ENST00000344404 CDK17Q00537 523 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 GLRA4Q5JXX5 417 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 ALKBH5Q6P6C2 394 aaKnown RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 CDR2LQ86X02 465 aaPredicted RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 ZBED8Q8IZ13 594 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 GPRC5AQ8NFJ5 357 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 IL1RL2Q9HB29 575 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 PLAAQ9Y263 795 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 NCK2O43639 380 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 PGK2P07205 417 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 ANKS6Q68DC2 871 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 SLC30A5Q8TAD4 765 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 CD274Q9NZQ7 290 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 IPO5O00410 1097 aaKnown RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 FKBP9O95302 570 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 GGPS1O95749 300 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 HIST1H2AGP0C0S8 130 aaPredicted RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 HIST1H2ADP20671 130 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 PDIA2Q13087 525 aaKnown RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 ZRANB3Q5FWF4 1079 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 FKBP9P1Q75LS8 142 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 CCDC33Q8N5R6 958 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 ZNF564Q8TBZ8 553 aaPredicted RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 MAGED4Q96JG8 741 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 HIST1H2AHQ96KK5 128 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 HIST1H2AJQ99878 128 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 TSEN34Q9BSV6 310 aaKnown RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 H2AFJQ9BTM1 129 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 KATNAL1Q9BW62 490 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 JPH1Q9HDC5 661 aaPredicted RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 IYDQ6PHW0 289 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 DIS3LQ8TF46 1054 aaKnown RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 TRIM8Q9BZR9 551 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 LSG1Q9H089 658 aaKnown RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 BRD8Q9H0E9 1235 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 ZFP69BQ9UJL9 534 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 USP6P35125 1406 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 RASSF10A6NK89 507 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 APOL1O14791 398 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 EPHB4P54760 987 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 FAM136AQ96C01 138 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 AGO2Q9UKV8 859 aaKnown RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 MROH7-TTC4A0A0A0MT08 1334 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 KRT37O76014 449 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 CYP2E1P05181 493 aaPredicted RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 ALDH18A1P54886 795 aaKnown RBP12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 SLC39A14Q15043 492 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 XXYLT1Q8NBI6 393 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 SSH3Q8TE77 659 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 ZNF556Q9HAH1 456 aa12.89□□□□□ -0.35
TRIOBP-202ENST00000344404 DDNO94850 711 aaPredicted RBP12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 MIER2Q8N344 545 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 PCDHB8Q9UN66 801 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 COPG1Q9Y678 874 aaKnown RBP12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 PP2D1A8MPX8 630 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 TRIM49P0CI25 452 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 TRIM49CP0CI26 452 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 CETPP11597 493 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 RAG1P15918 1043 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 GUCA1AP43080 201 aaPredicted RBP12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 STAT5BP51692 787 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 LDHDQ86WU2 507 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 NSUN7Q8NE18 718 aaKnown RBP12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 MCPH1Q8NEM0 835 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 CPA5Q8WXQ8 436 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 FAM118BQ9BPY3 351 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 FAM49BQ9NUQ9 324 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 DCDC2CA8MYV0 355 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 MLNP12872 115 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 DPYDQ12882 1025 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 ARHGAP15Q53QZ3 475 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 C10orf120Q5SQS8 335 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 BEND6Q5SZJ8 279 aaPredicted RBP12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 GLT1D1Q96MS3 346 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 C17orf80Q9BSJ5 609 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 TUBB6Q9BUF5 446 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 GGT7Q9UJ14 662 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 H0Y626 953 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 QARSP47897 775 aaKnown RBP12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 SEMA3FQ13275 785 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 CYTH1Q15438 398 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 C6orf10Q5SRN2 563 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 EFCAB12Q6NXP0 572 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 NEK9Q8TD19 979 aa12.88□□□□□ -0.35
TRIOBP-202ENST00000344404 ZCCHC11Q5TAX3 1644 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms