RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 C12orf76Q8N812 135 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-203ENST00000340192 C18orf25Q96B23 403 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-203ENST00000340192 FBXL18Q96ME1 805 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 ADAM7Q9H2U9 754 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 MRPL44Q9H9J2 332 aaKnown RBP15.95■□□□□ 0.14
ERCC1-203ENST00000340192 TBC1D7Q9P0N9 293 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 CDH22Q9UJ99 828 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 PCDHA7Q9UN72 937 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 ZDHHC9Q9Y397 364 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 C2orf16Q68DN1 1984 aa15.95■□□□□ 0.14
ERCC1-203ENST00000340192 A0A0B4J269 797 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 FAM189A1O60320 539 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 B3GAT3O94766 335 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 CLTAP09496 248 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 CXCL8P10145 99 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 IDEP14735 1019 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 TNFSF9P41273 254 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 RTP2Q5QGT7 225 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 RARS2Q5T160 578 aaKnown RBP15.94■□□□□ 0.14
ERCC1-203ENST00000340192 CES5AQ6NT32 575 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 DCLRE1AQ6PJP8 1040 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 PRSS55Q6UWB4 352 aaPredicted RBP15.94■□□□□ 0.14
ERCC1-203ENST00000340192 CEP57Q86XR8 500 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 GPR65Q8IYL9 337 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 C3orf58Q8NDZ4 430 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 STAMQ92783 540 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 DHX58Q96C10 678 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 TTPALQ9BTX7 342 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 MSTO1Q9BUK6 570 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 PHF7Q9BWX1 381 aaPredicted RBP15.94■□□□□ 0.14
ERCC1-203ENST00000340192 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.94■□□□□ 0.14
ERCC1-203ENST00000340192 FNIP2Q9P278 1114 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 ANK1P16157 1881 aa15.94■□□□□ 0.14
ERCC1-203ENST00000340192 FRMD3A2A2Y4 597 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 SPDYE4A6NLX3 237 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 TISP43B9A030 160 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 ANKRD63C9JTQ0 380 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 OGTO15294 1046 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 PPP1R37O75864 691 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 WEE2P0C1S8 567 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 RPL17P18621 184 aaKnown RBP15.93■□□□□ 0.14
ERCC1-203ENST00000340192 CREMQ03060 361 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 ELAVL2Q12926 359 aaKnown RBP15.93■□□□□ 0.14
ERCC1-203ENST00000340192 KYAT1Q16773 422 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 HERC4Q5GLZ8 1057 aaPredicted RBP15.93■□□□□ 0.14
ERCC1-203ENST00000340192 ZBTB41Q5SVQ8 909 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 CD300LGQ6UXG3 332 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 GLYCTKQ8IVS8 523 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 IQUBQ8NA54 791 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 HVCN1Q96D96 273 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 DDX27Q96GQ7 796 aaKnown RBP15.93■□□□□ 0.14
ERCC1-203ENST00000340192 STRA6Q9BX79 667 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 TNMDQ9H2S6 317 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 IKZF4Q9H2S9 585 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 CUEDC2Q9H467 287 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 EPHX3Q9H6B9 360 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 PLEKHA5Q9HAU0 1116 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 MAN1C1Q9NR34 630 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 OLFML3Q9NRN5 406 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 PANK4Q9NVE7 773 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 KBTBD4Q9NVX7 518 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 RCOR1Q9UKL0 485 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 TCHHQ07283 1943 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 DENND4AQ7Z401 1863 aa15.93■□□□□ 0.14
ERCC1-203ENST00000340192 TTC26A0AVF1 554 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 LOC730098B7Z3J9 87 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 PODXLO00592 558 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 GLUD1P00367 558 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 SPATA31D3P0C874 917 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 CASP5P51878 434 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 PPP2R3AQ06190 1150 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 SPAG1Q07617 926 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 KCNA1Q09470 495 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 ENOX2Q16206 610 aaKnown RBP15.92■□□□□ 0.14
ERCC1-203ENST00000340192 RESP18Q5W5W9 173 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 TMC5Q6UXY8 1006 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.92■□□□□ 0.14
ERCC1-203ENST00000340192 SPATA31D4Q6ZUB0 917 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 PALB2Q86YC2 1186 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 LNX1Q8TBB1 728 aaPredicted RBP15.92■□□□□ 0.14
ERCC1-203ENST00000340192 FEZF2Q8TBJ5 459 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 PIK3R5Q8WYR1 880 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 CHAMP1Q96JM3 812 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 RPGRIP1Q96KN7 1286 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 LRRC27Q9C0I9 530 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 SFXN1Q9H9B4 322 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 RPF1Q9H9Y2 349 aaKnown RBP15.92■□□□□ 0.14
ERCC1-203ENST00000340192 TUBGCP4Q9UGJ1 667 aa15.92■□□□□ 0.14
ERCC1-203ENST00000340192 LACTBL1A8MY62 500 aa15.91■□□□□ 0.14
ERCC1-203ENST00000340192 PI4K2BG5E9Z4 385 aa15.91■□□□□ 0.14
ERCC1-203ENST00000340192 I3L4J1 428 aa15.91■□□□□ 0.14
ERCC1-203ENST00000340192 POLR2DO15514 142 aaKnown RBP15.91■□□□□ 0.14
ERCC1-203ENST00000340192 TRAPPC3O43617 180 aa15.91■□□□□ 0.14
ERCC1-203ENST00000340192 GCNT3O95395 438 aa15.91■□□□□ 0.14
ERCC1-203ENST00000340192 MYBP10242 640 aa15.91■□□□□ 0.14
ERCC1-203ENST00000340192 FGFR3P22607 806 aa15.91■□□□□ 0.14
ERCC1-203ENST00000340192 RPL9P32969 192 aaKnown RBP15.91■□□□□ 0.14
ERCC1-203ENST00000340192 MTHFRP42898 656 aa15.91■□□□□ 0.14
ERCC1-203ENST00000340192 BRCC3P46736 316 aa15.91■□□□□ 0.14
ERCC1-203ENST00000340192 BECN1Q14457 450 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms