RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 FAM212AQ96EL1 285 aa16.6■□□□□ 0.25
UBE3B-201ENST00000340074 SAAL1Q96ER3 474 aa16.6■□□□□ 0.25
UBE3B-201ENST00000340074 ZBP1Q9H171 429 aa16.6■□□□□ 0.25
UBE3B-201ENST00000340074 PCIF1Q9H4Z3 704 aa16.6■□□□□ 0.25
UBE3B-201ENST00000340074 NGRNQ9NPE2 291 aaKnown RBP16.6■□□□□ 0.25
UBE3B-201ENST00000340074 ADAM28Q9UKQ2 775 aa16.6■□□□□ 0.25
UBE3B-201ENST00000340074 C5orf42Q9H799 3197 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 SCN1AP35498 2009 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 HIDE1A8MVS5 230 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 TGFB1I1O43294 461 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 PRPF40AO75400 957 aaKnown RBP16.59■□□□□ 0.25
UBE3B-201ENST00000340074 TADA2AO75478 443 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 RHOBTB3O94955 611 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 KIF4AO95239 1232 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 EFEMP2O95967 443 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 ADRB2P07550 413 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 UBE2HP62256 183 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 HYAL1Q12794 435 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 SMC1AQ14683 1233 aaKnown RBP16.59■□□□□ 0.25
UBE3B-201ENST00000340074 UPP1Q16831 310 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 RBM23Q86U06 439 aaKnown RBP16.59■□□□□ 0.25
UBE3B-201ENST00000340074 AUTS2Q8WXX7 1259 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 FAM213AQ9BRX8 229 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 PLXNA3P51805 1871 aa16.59■□□□□ 0.25
UBE3B-201ENST00000340074 GOLGA8IPA6NC78 632 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 GOLGA8JA6NMD2 632 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 PER2O15055 1255 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
UBE3B-201ENST00000340074 CXCL14O95715 111 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 LDHAP00338 332 aaKnown RBP16.58■□□□□ 0.24
UBE3B-201ENST00000340074 CTSAP10619 480 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 IGFBP6P24592 240 aaPredicted RBP16.58■□□□□ 0.24
UBE3B-201ENST00000340074 CA8P35219 290 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 KCNB1Q14721 858 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 ZBTB6Q15916 424 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 KNOP1Q1ED39 458 aaKnown RBP16.58■□□□□ 0.24
UBE3B-201ENST00000340074 FUT10Q6P4F1 479 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 CLEC17AQ6ZS10 378 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 TAS1R1Q7RTX1 841 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 RNF168Q8IYW5 571 aaPredicted RBP16.58■□□□□ 0.24
UBE3B-201ENST00000340074 TMEM130Q8N3G9 435 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 MRPL43Q8N983 215 aaKnown RBP16.58■□□□□ 0.24
UBE3B-201ENST00000340074 NOC3LQ8WTT2 800 aaKnown RBP16.58■□□□□ 0.24
UBE3B-201ENST00000340074 PPP2R3CQ969Q6 453 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 KIF12Q96FN5 646 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 UROC1Q96N76 676 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 GPR62Q9BZJ7 368 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 IGFLR1Q9H665 355 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 TLE6Q9H808 572 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 STK39Q9UEW8 545 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 TUBGCP4Q9UGJ1 667 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 A0A0C4DFX4 3053 aa16.58■□□□□ 0.24
UBE3B-201ENST00000340074 MTCL1Q9Y4B5 1905 aaKnown RBP16.58■□□□□ 0.24
UBE3B-201ENST00000340074 C2orf71A6NGG8 1288 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 CLIC2O15247 247 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 EXTL3O43909 919 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 B3GAT3O94766 335 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 SOD2P04179 222 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 NRIP1P48552 1158 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 BMS1Q14692 1282 aaKnown RBP16.57■□□□□ 0.24
UBE3B-201ENST00000340074 JADE1Q6IE81 842 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 DCLRE1AQ6PJP8 1040 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 CD302Q8IX05 232 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 GPD1LQ8N335 351 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 C3orf58Q8NDZ4 430 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 ERCC4Q92889 916 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-201ENST00000340074 HERC2P3Q9BVR0 1158 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 AGPAT3Q9NRZ7 376 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 HSPBP1Q9NZL4 362 aa16.57■□□□□ 0.24
UBE3B-201ENST00000340074 HOOK1Q9UJC3 728 aaKnown RBP16.57■□□□□ 0.24
UBE3B-201ENST00000340074 VCANP13611 3396 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.56■□□□□ 0.24
UBE3B-201ENST00000340074 PODXLO00592 558 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 KIAA0391O15091 583 aaKnown RBP16.56■□□□□ 0.24
UBE3B-201ENST00000340074 NFICP08651 508 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 WNT7BP56706 349 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 SNRPFP62306 86 aaKnown RBP16.56■□□□□ 0.24
UBE3B-201ENST00000340074 POU5F1Q01860 360 aaKnown RBP16.56■□□□□ 0.24
UBE3B-201ENST00000340074 HS2ST1Q7LGA3 356 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 HLA-CQ95604 372 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 PABPC5Q96DU9 382 aaKnown RBP16.56■□□□□ 0.24
UBE3B-201ENST00000340074 DDX27Q96GQ7 796 aaKnown RBP16.56■□□□□ 0.24
UBE3B-201ENST00000340074 B3GALT6Q96L58 329 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 ASB7Q9H672 318 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 RBAKQ9NYW8 714 aaPredicted RBP16.56■□□□□ 0.24
UBE3B-201ENST00000340074 UBQLN1Q9UMX0 589 aaKnown RBP16.56■□□□□ 0.24
UBE3B-201ENST00000340074 MAPK8IP1Q9UQF2 711 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 PCDHA5Q9Y5H7 936 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 IRAK3Q9Y616 596 aa16.56■□□□□ 0.24
UBE3B-201ENST00000340074 TCF20Q9UGU0 1960 aaKnown RBP16.56■□□□□ 0.24
UBE3B-201ENST00000340074 SF3B1O75533 1304 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBE3B-201ENST00000340074 TMEM189-UBE2V1I3L0A0 370 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 TULP1O00294 542 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-201ENST00000340074 C2CD2LO14523 706 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 LINC01565O15544 149 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 URODP06132 367 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 RPL9P32969 192 aaKnown RBP16.55■□□□□ 0.24
UBE3B-201ENST00000340074 COL19A1Q14993 1142 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 TMEM132DQ14C87 1099 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 PTPN14Q15678 1187 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms