RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 UBL4AP11441 157 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 PTGDRQ13258 359 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 ITGA9Q13797 1035 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 DUPD1Q68J44 220 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 UGT2A3Q6UWM9 527 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 RGS9BPQ6ZS82 235 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 TMTC3Q6ZXV5 915 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 JAMLQ86YT9 394 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 ZFPM1Q8IX07 1006 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 DEPDC4Q8N2C3 294 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 CENPSQ8N2Z9 138 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 CCDC28BQ9BUN5 200 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 MAN1C1Q9NR34 630 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 SLC38A7Q9NVC3 462 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 DDX56Q9NY93 547 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 NKIRAS1Q9NYS0 192 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 TAS2R1Q9NYW7 299 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 DSEQ9UL01 958 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 KIAA1257Q9ULG3 409 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 ITSN1Q15811 1721 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 PITPNM2Q9BZ72 1349 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 CPDO75976 1380 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 BUD23O43709 281 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 ZC3H11AO75152 810 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 ENO2P09104 434 aaPredicted RBP10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 C6orf222P0C671 652 aaPredicted RBP10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 NELFEP18615 380 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 PON1P27169 355 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 CIITAP33076 1130 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 RPL5P46777 297 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 SEPT6Q14141 434 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 KCNJ8Q15842 424 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 IL17AQ16552 155 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 ZNF423Q2M1K9 1284 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 RNF19BQ6ZMZ0 732 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 PEX26Q7Z412 305 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 PDSS2Q86YH6 399 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 PRPF18Q99633 342 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 MRPL46Q9H2W6 279 aaKnown RBP10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 GRHL1Q9NZI5 618 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 MTUS1Q9ULD2 1270 aa10.23□□□□□ -0.77
PTCHD4-201ENST00000339488 A0A1W2PQJ5 194 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 BTBD19C9JJ37 291 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 J3QRK9 145 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 ZNF213O14771 459 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 SORBS2O94875 1100 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 CHRNB1P11230 501 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 CDH3P22223 829 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 IL4RP24394 825 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 CETN2P41208 172 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 NKX2-5P52952 324 aaPredicted RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 POU5F1Q01860 360 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 CYP2A13Q16696 494 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 RNF111Q6ZNA4 994 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 DCDC5Q6ZRR9 648 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 FBXL8Q96CD0 374 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 CSRNP1Q96S65 589 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 POP1Q99575 1024 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 CGREF1Q99674 301 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 HGH1Q9BTY7 390 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 PAIP1Q9H074 479 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 ALG13Q9NP73 1137 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 VTA1Q9NP79 307 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 EMILIN3Q9NT22 766 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 ASAP1Q9ULH1 1129 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 ABCB11O95342 1321 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 LOC105371267A0A1B0GV96 52 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 KIAA0391O15091 583 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 CCDC22O60826 627 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 TMCC2O75069 709 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 UQCRBP14927 111 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 GLULP15104 373 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 PRKACBP22694 351 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 PMLP29590 882 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 GNA11P29992 359 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 HNRNPH3P31942 346 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 MCM7P33993 719 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 PHBP35232 272 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 HSD17B4P51659 736 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 PSMC1P62191 440 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 GRM2Q14416 872 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 TNFAIP8L3Q5GJ75 292 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 KIAA1755Q5JYT7 1200 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 SPOPLQ6IQ16 392 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 AMIGO2Q86SJ2 522 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 LRRC6Q86X45 466 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 MCF2L2Q86YR7 1114 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 TMPRSS6Q8IU80 811 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 ALDH16A1Q8IZ83 802 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 PPM1KQ8N3J5 372 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 GLIS3Q8NEA6 775 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 GSDMBQ8TAX9 411 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 SEC14L1Q92503 715 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 ERGIC2Q96RQ1 377 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 C12orf65Q9H3J6 166 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 CDC42EP4Q9H3Q1 356 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 RNF41Q9H4P4 317 aaPredicted RBP10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 SLITRK6Q9H5Y7 841 aa10.22□□□□□ -0.77
PTCHD4-201ENST00000339488 NEU2Q9Y3R4 380 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms