RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 ZBED4O75132 1171 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 KRT19P08727 400 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 ETS1P14921 441 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 PTGIRP43119 386 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 CDR2Q01850 454 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 POU5F1Q01860 360 aaKnown RBP12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 LIN9Q5TKA1 542 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 SUPT20HQ8NEM7 779 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 LMO3Q8TAP4 145 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 SYTL5Q8TDW5 730 aaPredicted RBP12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 FAM151AQ8WW52 585 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 PRCCQ92733 491 aaPredicted RBP12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 SGSM3Q96HU1 749 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 IWS1Q96ST2 819 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 MYCBPQ99417 103 aaPredicted RBP12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 AGO4Q9HCK5 861 aaKnown RBP12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 GTF3C4Q9UKN8 822 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 AGTPBP1Q9UPW5 1226 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 LRRD1A4D1F6 860 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 SUN1O94901 812 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 AGTP01019 485 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 CFHP08603 1231 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 RARGP13631 454 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 ADSSP30520 456 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 P3H1Q32P28 736 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 AEBP2Q6ZN18 517 aaPredicted RBP12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 ZKSCAN4Q969J2 545 aaPredicted RBP12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 ATG4CQ96DT6 458 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 RNF146Q9NTX7 359 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 SGK1O00141 431 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 MARK3P27448 753 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 ZNF131P52739 623 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 BTNL9Q6UXG8 535 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 DEPTORQ8TB45 409 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 BSNDQ8WZ55 320 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 AKT1S1Q96B36 256 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 ECT2Q9H8V3 914 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 ZWILCHQ9H900 591 aa12.57□□□□□ -0.4
EFCAB13-201ENST00000331493 PIK3R2O00459 728 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 ORC1Q13415 861 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 SMTNL2Q2TAL5 461 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 ACAD10Q6JQN1 1059 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 IMPG2Q9BZV3 1241 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 SAE1Q9UBE0 346 aaPredicted RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 NXF1Q9UBU9 619 aaKnown RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 ASTN2O75129 1339 aaPredicted RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 HLA-DRAP01903 254 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 KRT1P04264 644 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 KCNJ2P63252 427 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 DNAJC3Q13217 504 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 FAM71AQ8IYT1 594 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 SNF8Q96H20 258 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 POLR3FQ9H1D9 316 aaPredicted RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 KLHL14Q9P2G3 628 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 BANF1O75531 89 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 CCNE2O96020 404 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 GNA15P30679 374 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 PEX5P50542 639 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 GPS1Q13098 491 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 SNRNP48Q6IEG0 339 aaKnown RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 C11orf63Q6NUN7 778 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 RBM15Q96T37 977 aaKnown RBP eCLIP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 TARS2Q9BW92 718 aaKnown RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 PITPNM3Q9BZ71 974 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 RANBP17Q9H2T7 1088 aaKnown RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 RPAP3Q9H6T3 665 aaPredicted RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 PCDHA3Q9Y5H8 950 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 MAST2Q6P0Q8 1798 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 ADAMTSL1Q8N6G6 1762 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 ICAM1P05362 532 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 SRGAP2CP0DJJ0 459 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 SMAD1Q15797 465 aaKnown RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 SLC15A2Q16348 729 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 C1orf220Q5T0J3 134 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 RSBN1LQ6PCB5 846 aaPredicted RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 SUGP1Q8IWZ8 645 aaKnown RBP12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 HERPUD2Q9BSE4 406 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 OSBPL8Q9BZF1 889 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 KIF9Q9HAQ2 790 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 TMEM8AQ9HCN3 771 aa12.56□□□□□ -0.4
EFCAB13-201ENST00000331493 H0Y3Z8 333 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 K7ERI5 159 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 SLC26A4O43511 780 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 CA4P22748 312 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 NOP14P78316 857 aaKnown RBP12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 NIM1KQ8IY84 436 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 GPD1LQ8N335 351 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 WNK4Q96J92 1243 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 RPS6KC1Q96S38 1066 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 EPB41L4BQ9H329 900 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 TBC1D22BQ9NU19 505 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 NOCTQ9UK39 431 aaKnown RBP12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 PCDHA10Q9Y5I2 948 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 IGF2BP3O00425 579 aaKnown RBP eCLIP12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 CLUL1Q15846 466 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 CNGA2Q16280 664 aa12.55□□□□□ -0.4
EFCAB13-201ENST00000331493 TRIM68Q6AZZ1 485 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms