RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 FAM136AQ96C01 138 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 NAP1L4Q99733 375 aaKnown RBP19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 BCAS3Q9H6U6 928 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 GPCPD1Q9NPB8 672 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 DLGAP2Q9P1A6 1054 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 USP20Q9Y2K6 914 aa19.31■□□□□ 0.68
CLSTN3-202ENST00000331148 PNMA6FA0A0J9YX94 578 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 IRF6O14896 467 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 MAPK13O15264 365 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 TGFB1I1O43294 461 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 THAP12O43422 761 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 FTLP02792 175 aaPredicted RBP19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 T-ENOLP0DO92 83 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 PSMC2P35998 433 aaKnown RBP19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 RFC5P40937 340 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 MOGSQ13724 837 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 ARHGAP44Q17R89 818 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 CBWD6Q4V339 395 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 CBWD3Q5JTY5 395 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 CBWD5Q5RIA9 395 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 IRGCQ6NXR0 463 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 CLEC10AQ8IUN9 316 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 RBBP8NLQ8NC74 664 aaPredicted RBP19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 DENND2DQ9H6A0 471 aaPredicted RBP19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 LRRC19Q9H756 370 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 APEX2Q9UBZ4 518 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 ASIC3Q9UHC3 531 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 LTBP3Q9NS15 1303 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 ENTPD5O75356 428 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 DCTN3O75935 186 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 WDR4P57081 412 aaKnown RBP19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 SPDYE2Q495Y8 402 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 ZNF449Q6P9G9 518 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 SLCO2A1Q92959 643 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 ZNF333Q96JL9 665 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 CSRNP1Q96S65 589 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 RUSC1Q9BVN2 902 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 IKZF4Q9H2S9 585 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 VCXQ9H320 206 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 JMJD4Q9H9V9 463 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 NINJ2Q9NZG7 142 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 DNM3Q9UQ16 869 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 NAALADL1Q9UQQ1 740 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 ACTL7BQ9Y614 415 aa19.3■□□□□ 0.68
CLSTN3-202ENST00000331148 ZMYM2Q9UBW7 1377 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 MROH7Q68CQ1 1323 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 NVLO15381 856 aaKnown RBP19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 LRRN2O75325 713 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 DLATP10515 647 aaKnown RBP19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 ITIH2P19823 946 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 GPC5P78333 572 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 RNF220Q5VTB9 566 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 OR52E8Q6IFG1 317 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 UCMAQ8WVF2 138 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 FAM151AQ8WW52 585 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 IFT43Q96FT9 208 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 NMRK1Q9NWW6 199 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 CHORDC1Q9UHD1 332 aaPredicted RBP19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 PHTF1Q9UMS5 762 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 RPL26L1Q9UNX3 145 aaKnown RBP19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 GREB1LQ9C091 1923 aaPredicted RBP19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 ARFGEF1Q9Y6D6 1849 aa19.29■□□□□ 0.68
CLSTN3-202ENST00000331148 MAGEB2O15479 319 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 CDH16O75309 829 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 DNAJC3Q13217 504 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 CPNE8Q86YQ8 564 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 NLGN2Q8NFZ4 835 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 SNF8Q96H20 258 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 PAIP2Q9BPZ3 127 aaKnown RBP19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 FAM47DPA6NHR8 397 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 TRAFD1O14545 582 aaPredicted RBP19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 TBCAO75347 108 aaKnown RBP19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 CBX6O95503 412 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 LMNAP02545 664 aaKnown RBP19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 SNHG28P0DPA3 235 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 CHRNB2P17787 502 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 TMEM63BQ5T3F8 832 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 FKBP1CQ5VVH2 108 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 MORC4Q8TE76 937 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 SPOCK2Q92563 424 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 KIFAP3Q92845 792 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 TRIM4Q9C037 500 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 DCLRE1BQ9H816 532 aa19.28■□□□□ 0.68
CLSTN3-202ENST00000331148 FOXN3O00409 490 aaPredicted RBP19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 RASSF2P50749 326 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 ITGA8P53708 1063 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 SPIRE1Q08AE8 756 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 ADGRF4Q8IZF3 695 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 C1orf54Q8WWF1 131 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 PSTPIP2Q9H939 334 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 HERC5Q9UII4 1024 aaKnown RBP19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 SIGLEC16A6NMB1 481 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 SPOPO43791 374 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 ASMTLO95671 621 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 TRIM49P0CI25 452 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 TRIM49CP0CI26 452 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 SPATA31C1P0DKV0 1188 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 MYL7Q01449 175 aa19.27■□□□□ 0.68
CLSTN3-202ENST00000331148 TMEM179Q6ZVK1 233 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms