RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 MYBP10242 640 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 NCKAP1LP55160 1127 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 GTF2BQ00403 316 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 DMP1Q13316 513 aaPredicted RBP17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 FAM187BQ17R55 369 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 CCDC40Q4G0X9 1142 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 VWA3BQ502W6 1294 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 C12orf56Q8IXR9 622 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 DEPTORQ8TB45 409 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 IFT74Q96LB3 600 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 EDEM3Q9BZQ6 932 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 KCNF1Q9H3M0 494 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 NXF3Q9H4D5 531 aaKnown RBP17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 MIOSQ9NXC5 875 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 PHLPP2Q6ZVD8 1323 aa17.87■□□□□ 0.45
PDLIM1-201ENST00000329399 SLC16A4O15374 487 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 TEX33O43247 280 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 STX10O60499 249 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 NPTXRO95502 500 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 PRKCBP05771 671 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 SKILP12757 684 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 NR2F2P24468 414 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 PPP2R5AQ15172 486 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 NOTUMQ6P988 496 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 ZNF280BQ86YH2 543 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 CREBRFQ8IUR6 639 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 NELFCDQ8IXH7 590 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 COLGALT1Q8NBJ5 622 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 GLIS3Q8NEA6 775 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 SPPL3Q8TCT6 385 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 SAMD11Q96NU1 681 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 PDZD7Q9H5P4 517 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 ARHGAP28Q9P2N2 729 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 INPP5FQ9Y2H2 1132 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 PCDHGC5Q9Y5F6 944 aa17.86■□□□□ 0.45
PDLIM1-201ENST00000329399 CUL9Q8IWT3 2517 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 NT5C1B-RDH14C9J2C7 533 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 ACKR2O00590 384 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 PRPF6O94906 941 aaKnown RBP17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 RB1P06400 928 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 EPB41P11171 864 aaKnown RBP17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 AKAP5P24588 427 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 AXLP30530 894 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 CASP5P51878 434 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 ARMCX5Q6P1M9 558 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 ZBTB8OSQ8IWT0 167 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 APOL6Q9BWW8 343 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 NDST4Q9H3R1 872 aa17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 PRMT7Q9NVM4 692 aaPredicted RBP17.85■□□□□ 0.45
PDLIM1-201ENST00000329399 CNTNAP2Q9UHC6 1331 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 A0A1W2PQJ5 194 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 K7ENM7 598 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 MAPK13O15264 365 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 DDHD2O94830 711 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 NR3C1P04150 777 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 NMT1P30419 496 aaKnown RBP17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 HOXD13P35453 343 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 IRS1P35568 1242 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 RAB27AP51159 221 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 PRPF4BQ13523 1007 aaKnown RBP17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 PCBP1Q15365 356 aaKnown RBP eCLIP17.84■□□□□ 0.458e-8■■■□□ 14.8
PDLIM1-201ENST00000329399 MAPK6Q16659 721 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 NOMO2Q5JPE7 1267 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 MIIPQ5JXC2 388 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 SPOUT1Q5T280 376 aaKnown RBP17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 TMEM173Q86WV6 379 aaPredicted RBP17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 TRIM59Q8IWR1 403 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 ABI1Q8IZP0 508 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 SYCP3Q8IZU3 236 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 TMEM161BQ8NDZ6 487 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 ZFP42Q96MM3 310 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 ZNF830Q96NB3 372 aaPredicted RBP17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 FGFBP2Q9BYJ0 223 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 C2orf40Q9H1Z8 148 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 TBC1D13Q9NVG8 400 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 DNAJB4Q9UDY4 337 aa17.84■□□□□ 0.45
PDLIM1-201ENST00000329399 K7ERI5 159 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 ARHGAP6O43182 974 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 POMCP01189 267 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 TUBB4AP04350 444 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 PSMC2P35998 433 aaKnown RBP17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 ENPEPQ07075 957 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 TSR1Q2NL82 804 aaKnown RBP17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 SLC27A1Q6PCB7 646 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 HAUS6Q7Z4H7 955 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 GSTCDQ8NEC7 633 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 ZNF397Q8NF99 534 aaPredicted RBP17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 BCL7CQ8WUZ0 217 aaPredicted RBP17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 MRPL38Q96DV4 380 aaKnown RBP17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 ZBTB45Q96K62 511 aaPredicted RBP17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 PRIMPOLQ96LW4 560 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 GAD1Q99259 594 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 C11orf84Q9BUA3 381 aaPredicted RBP17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 PLVAPQ9BX97 442 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 NRDE2Q9H7Z3 1164 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 KMT5AQ9NQR1 393 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 SPTLC3Q9NUV7 552 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 DMAC2Q9NW81 257 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 KLK14Q9P0G3 267 aa17.83■□□□□ 0.45
PDLIM1-201ENST00000329399 ARMCX3Q9UH62 379 aaPredicted RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms