RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 PCIF1Q9H4Z3 704 aa16.84■□□□□ 0.29
TSFM-201ENST00000323833 RPF1Q9H9Y2 349 aaKnown RBP16.84■□□□□ 0.29
TSFM-201ENST00000323833 NGRNQ9NPE2 291 aaKnown RBP16.84■□□□□ 0.29
TSFM-201ENST00000323833 EXOC1Q9NV70 894 aa16.84■□□□□ 0.29
TSFM-201ENST00000323833 ADAM28Q9UKQ2 775 aa16.84■□□□□ 0.29
TSFM-201ENST00000323833 SCN1AP35498 2009 aa16.84■□□□□ 0.29
TSFM-201ENST00000323833 LINC01565O15544 149 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 TADA2AO75478 443 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 KIF4AO95239 1232 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 EFEMP2O95967 443 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 CTSAP10619 480 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 CLCNKBP51801 687 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 TFF2Q03403 129 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 PPP2R3AQ06190 1150 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 STK4Q13043 487 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 FUT10Q6P4F1 479 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
TSFM-201ENST00000323833 EP400NLQ6ZTU2 488 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.83■□□□□ 0.28
TSFM-201ENST00000323833 KIAA0895Q8NCT3 520 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 HLA-CQ95604 372 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 PPP2R3CQ969Q6 453 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 SAAL1Q96ER3 474 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 CBWD1Q9BRT8 395 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 GPR62Q9BZJ7 368 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 TLE6Q9H808 572 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 PLEKHA5Q9HAU0 1116 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 CLDND1Q9NY35 253 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 THEGQ9P2T0 379 aa16.83■□□□□ 0.28
TSFM-201ENST00000323833 UBE4BO95155 1302 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.82■□□□□ 0.28
TSFM-201ENST00000323833 GOLGA8IPA6NC78 632 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 C2orf71A6NGG8 1288 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 GOLGA8JA6NMD2 632 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 TGFB1I1O43294 461 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 SOD2P04179 222 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 GARTP22102 1010 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 PSMD2Q13200 908 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 PNOCQ13519 176 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 UPP1Q16831 310 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 KANK3Q6NY19 840 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 RNF168Q8IYW5 571 aaPredicted RBP16.82■□□□□ 0.28
TSFM-201ENST00000323833 MRPL43Q8N983 215 aaKnown RBP16.82■□□□□ 0.28
TSFM-201ENST00000323833 TMEM87AQ8NBN3 555 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 NOC3LQ8WTT2 800 aaKnown RBP16.82■□□□□ 0.28
TSFM-201ENST00000323833 KIF12Q96FN5 646 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 B3GALT6Q96L58 329 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 FAM213AQ9BRX8 229 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 HERC2P3Q9BVR0 1158 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 UBE2ZQ9H832 354 aaPredicted RBP16.82■□□□□ 0.28
TSFM-201ENST00000323833 SLC38A7Q9NVC3 462 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 TUBGCP4Q9UGJ1 667 aa16.82■□□□□ 0.28
TSFM-201ENST00000323833 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.81■□□□□ 0.28
TSFM-201ENST00000323833 C2CD2LO14523 706 aa16.81■□□□□ 0.28
TSFM-201ENST00000323833 CLIC2O15247 247 aa16.81■□□□□ 0.28
TSFM-201ENST00000323833 ADRB2P07550 413 aa16.81■□□□□ 0.28
TSFM-201ENST00000323833 RBM10P98175 930 aaKnown RBP16.81■□□□□ 0.28
TSFM-201ENST00000323833 BMS1Q14692 1282 aaKnown RBP16.81■□□□□ 0.28
TSFM-201ENST00000323833 PTPN14Q15678 1187 aa16.81■□□□□ 0.28
TSFM-201ENST00000323833 BMT2Q1RMZ1 405 aa16.81■□□□□ 0.28
TSFM-201ENST00000323833 JADE1Q6IE81 842 aa16.81■□□□□ 0.28
TSFM-201ENST00000323833 CD300LGQ6UXG3 332 aa16.81■□□□□ 0.28
TSFM-201ENST00000323833 C3orf58Q8NDZ4 430 aa16.81■□□□□ 0.28
TSFM-201ENST00000323833 PABPC5Q96DU9 382 aaKnown RBP16.81■□□□□ 0.28
TSFM-201ENST00000323833 UROC1Q96N76 676 aa16.81■□□□□ 0.28
TSFM-201ENST00000323833 COG5Q9UP83 839 aa16.81■□□□□ 0.28
TSFM-201ENST00000323833 TULP1O00294 542 aaPredicted RBP16.8■□□□□ 0.28
TSFM-201ENST00000323833 PODXLO00592 558 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 B3GAT3O94766 335 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 RHOBTB3O94955 611 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 LDHAP00338 332 aaKnown RBP16.8■□□□□ 0.28
TSFM-201ENST00000323833 NFICP08651 508 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 KCNA5P22460 613 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 LTBRP36941 435 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 GUCY2FP51841 1108 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 WNT7BP56706 349 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 DLX2Q07687 328 aaPredicted RBP16.8■□□□□ 0.28
TSFM-201ENST00000323833 ADAM15Q13444 863 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 COL19A1Q14993 1142 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 ZBTB6Q15916 424 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 DUSP6Q16828 381 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 KNOP1Q1ED39 458 aaKnown RBP16.8■□□□□ 0.28
TSFM-201ENST00000323833 CTC1Q2NKJ3 1217 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 DCLRE1AQ6PJP8 1040 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 EFHBQ8N7U6 833 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 ERCC4Q92889 916 aaPredicted RBP16.8■□□□□ 0.28
TSFM-201ENST00000323833 CCDC47Q96A33 483 aaKnown RBP16.8■□□□□ 0.28
TSFM-201ENST00000323833 CCDC34Q96HJ3 373 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 TIGD1Q96MW7 591 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 STK39Q9UEW8 545 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 IRAK3Q9Y616 596 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 UNC80Q8N2C7 3258 aa16.8■□□□□ 0.28
TSFM-201ENST00000323833 SF3B1O75533 1304 aaKnown RBP eCLIP16.79■□□□□ 0.28
TSFM-201ENST00000323833 TMEM189-UBE2V1I3L0A0 370 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 I3L4J1 428 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 NCK2O43639 380 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 EXTL3O43909 919 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 LILRB3O75022 631 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 CLASP2O75122 1294 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms