RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 NRDE2Q9H7Z3 1164 aa24.51■■□□□ 1.51
LINC01116-201ENST00000295549 CARNS1A5YM72 827 aa24.5■■□□□ 1.51
LINC01116-201ENST00000295549 FGFR1OPO95684 399 aaKnown RBP24.5■■□□□ 1.51
LINC01116-201ENST00000295549 EPB41P11171 864 aaKnown RBP24.5■■□□□ 1.51
LINC01116-201ENST00000295549 CYP3A5P20815 502 aa24.5■■□□□ 1.51
LINC01116-201ENST00000295549 TUSC3Q13454 348 aa24.5■■□□□ 1.51
LINC01116-201ENST00000295549 INTS8Q75QN2 995 aaKnown RBP24.5■■□□□ 1.51
LINC01116-201ENST00000295549 COLGALT2Q8IYK4 626 aa24.5■■□□□ 1.51
LINC01116-201ENST00000295549 ENOX1Q8TC92 643 aaKnown RBP24.5■■□□□ 1.51
LINC01116-201ENST00000295549 PARD3BQ8TEW8 1205 aa24.5■■□□□ 1.51
LINC01116-201ENST00000295549 BORCS6Q96GS4 357 aa24.5■■□□□ 1.51
LINC01116-201ENST00000295549 TMEM175Q9BSA9 504 aa24.5■■□□□ 1.51
LINC01116-201ENST00000295549 SRRTQ9BXP5 876 aaKnown RBP24.5■■□□□ 1.51
LINC01116-201ENST00000295549 HCSTQ9UBK5 93 aa24.5■■□□□ 1.51
LINC01116-201ENST00000295549 UBQLN1Q9UMX0 589 aaKnown RBP24.5■■□□□ 1.51
LINC01116-201ENST00000295549 RWDD3Q9Y3V2 267 aa24.5■■□□□ 1.51
LINC01116-201ENST00000295549 XPOTO43592 962 aaKnown RBP24.49■■□□□ 1.51
LINC01116-201ENST00000295549 NFICP08651 508 aa24.49■■□□□ 1.51
LINC01116-201ENST00000295549 CLDN10P78369 228 aa24.49■■□□□ 1.51
LINC01116-201ENST00000295549 SPAG1Q07617 926 aa24.49■■□□□ 1.51
LINC01116-201ENST00000295549 TMEM132DQ14C87 1099 aa24.49■■□□□ 1.51
LINC01116-201ENST00000295549 ANO6Q4KMQ2 910 aa24.49■■□□□ 1.51
LINC01116-201ENST00000295549 USP37Q86T82 979 aa24.49■■□□□ 1.51
LINC01116-201ENST00000295549 TMC2Q8TDI7 906 aa24.49■■□□□ 1.51
LINC01116-201ENST00000295549 TIFAQ96CG3 184 aa24.49■■□□□ 1.51
LINC01116-201ENST00000295549 FNBP1Q96RU3 617 aa24.49■■□□□ 1.51
LINC01116-201ENST00000295549 GZF1Q9H116 711 aaPredicted RBP24.49■■□□□ 1.51
LINC01116-201ENST00000295549 NKX2-4Q9H2Z4 354 aa24.49■■□□□ 1.51
LINC01116-201ENST00000295549 B4GALT3O60512 393 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 ARHGEF15O94989 841 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 GNA14O95837 355 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 LAG3P18627 525 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 ALDH7A1P49419 539 aaKnown RBP24.48■■□□□ 1.51
LINC01116-201ENST00000295549 TAP1Q03518 808 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 SPATA1Q5VX52 437 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 WDR49Q8IV35 697 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 EFCAB13Q8IY85 973 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 CCDC127Q96BQ5 260 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 BPIFA3Q9BQP9 254 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 SLC28A3Q9HAS3 691 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 AAASQ9NRG9 546 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 DNAJB4Q9UDY4 337 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 CITO14578 2027 aa24.48■■□□□ 1.51
LINC01116-201ENST00000295549 ZC3H11AO75152 810 aaKnown RBP eCLIP24.47■■□□□ 1.51
LINC01116-201ENST00000295549 ALDH2P05091 517 aa24.47■■□□□ 1.51
LINC01116-201ENST00000295549 GALTP07902 379 aa24.47■■□□□ 1.51
LINC01116-201ENST00000295549 DLATP10515 647 aaKnown RBP24.47■■□□□ 1.51
LINC01116-201ENST00000295549 KRT13P13646 458 aa24.47■■□□□ 1.51
LINC01116-201ENST00000295549 BCAR1P56945 870 aa24.47■■□□□ 1.51
LINC01116-201ENST00000295549 SOX4Q06945 474 aaPredicted RBP24.47■■□□□ 1.51
LINC01116-201ENST00000295549 TPD52L1Q16890 204 aaPredicted RBP24.47■■□□□ 1.51
LINC01116-201ENST00000295549 SPOUT1Q5T280 376 aaKnown RBP24.47■■□□□ 1.51
LINC01116-201ENST00000295549 FRMD5Q7Z6J6 570 aa24.47■■□□□ 1.51
LINC01116-201ENST00000295549 PLEKHO2Q8TD55 490 aa24.47■■□□□ 1.51
LINC01116-201ENST00000295549 CACTINQ8WUQ7 758 aaKnown RBP24.47■■□□□ 1.51
LINC01116-201ENST00000295549 C18orf25Q96B23 403 aaPredicted RBP24.47■■□□□ 1.51
LINC01116-201ENST00000295549 UROC1Q96N76 676 aa24.47■■□□□ 1.51
LINC01116-201ENST00000295549 SAMD11Q96NU1 681 aa24.47■■□□□ 1.51
LINC01116-201ENST00000295549 TGS1Q96RS0 853 aaKnown RBP24.47■■□□□ 1.51
LINC01116-201ENST00000295549 METTL14Q9HCE5 456 aaKnown RBP24.47■■□□□ 1.51
LINC01116-201ENST00000295549 INTS13Q9NVM9 706 aa24.47■■□□□ 1.51
LINC01116-201ENST00000295549 IKBKBO14920 756 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 CAVIN2O95810 425 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 BMPR1AP36894 532 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 ERVK-21P61565 698 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 BFSP1Q12934 665 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 PPP2R2DQ66LE6 453 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 KCNT2Q6UVM3 1135 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 COLGALT1Q8NBJ5 622 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 BEST2Q8NFU1 509 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 DDX27Q96GQ7 796 aaKnown RBP24.46■■□□□ 1.51
LINC01116-201ENST00000295549 CGRRF1Q99675 332 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 ARMCX3Q9UH62 379 aaPredicted RBP24.46■■□□□ 1.51
LINC01116-201ENST00000295549 PCDHB12Q9Y5F1 795 aa24.46■■□□□ 1.51
LINC01116-201ENST00000295549 TNNI1P19237 187 aa24.45■■□□□ 1.51
LINC01116-201ENST00000295549 RPL9P32969 192 aaKnown RBP24.45■■□□□ 1.51
LINC01116-201ENST00000295549 VAMP7P51809 220 aa24.45■■□□□ 1.51
LINC01116-201ENST00000295549 MARSP56192 900 aaKnown RBP24.45■■□□□ 1.51
LINC01116-201ENST00000295549 TFAMQ00059 246 aaKnown RBP24.45■■□□□ 1.51
LINC01116-201ENST00000295549 DUOXA2Q1HG44 320 aa24.45■■□□□ 1.51
LINC01116-201ENST00000295549 ZNF558Q96NG5 402 aa24.45■■□□□ 1.51
LINC01116-201ENST00000295549 POP1Q99575 1024 aaKnown RBP24.45■■□□□ 1.51
LINC01116-201ENST00000295549 PLVAPQ9BX97 442 aa24.45■■□□□ 1.51
LINC01116-201ENST00000295549 THAP9Q9H5L6 903 aa24.45■■□□□ 1.51
LINC01116-201ENST00000295549 TUBGCP4Q9UGJ1 667 aa24.45■■□□□ 1.51
LINC01116-201ENST00000295549 TMEM265A0A087WTH1 108 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 LRRIQ3A6PVS8 624 aaPredicted RBP24.44■■□□□ 1.5
LINC01116-201ENST00000295549 NRP1O14786 923 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 RB1P06400 928 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 LRPAP1P30533 357 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 SLC11A1P49279 550 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 AP3M2P53677 418 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 MYL5Q02045 173 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 UPP1Q16831 310 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 HABP4Q5JVS0 413 aaKnown RBP24.44■■□□□ 1.5
LINC01116-201ENST00000295549 ANKRD36BP1Q96IX9 119 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 C17orf80Q9BSJ5 609 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 GOLGA2P5Q9HBQ8 144 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 FAN1Q9Y2M0 1017 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 NFE2L3Q9Y4A8 694 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms