RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 PRG2P13727 222 aa9.4□□□□□ -0.91
CTDSPL-201ENST00000273179 STK4Q13043 487 aa9.4□□□□□ -0.91
CTDSPL-201ENST00000273179 PLS1Q14651 629 aa9.4□□□□□ -0.91
CTDSPL-201ENST00000273179 CLEC17AQ6ZS10 378 aa9.4□□□□□ -0.91
CTDSPL-201ENST00000273179 ICA1LQ8NDH6 482 aa9.4□□□□□ -0.91
CTDSPL-201ENST00000273179 BBS2Q9BXC9 721 aa9.4□□□□□ -0.91
CTDSPL-201ENST00000273179 PCMTD2Q9NV79 361 aa9.4□□□□□ -0.91
CTDSPL-201ENST00000273179 TLK1Q9UKI8 766 aa9.4□□□□□ -0.91
CTDSPL-201ENST00000273179 ACEP12821 1306 aa9.4□□□□□ -0.91
CTDSPL-201ENST00000273179 TMEM2Q9UHN6 1383 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 TLR2O60603 784 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 NOL3O60936 208 aaKnown RBP9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 CNOT3O75175 753 aaKnown RBP9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 KRT9P35527 623 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 DIO1P49895 249 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 ZNF165P49910 485 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 ARHGDIBP52566 201 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 PHC1P78364 1004 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 PPARDQ03181 441 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 C1orf94Q6P1W5 598 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 PGM2L1Q6PCE3 622 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 TRPC4APQ8TEL6 797 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 RNF139Q8WU17 664 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 HS6ST2Q96MM7 605 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 OLFM1Q99784 485 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 FAM192AQ9GZU8 254 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 FAM53CQ9NYF3 392 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 EPS15L1Q9UBC2 864 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 FPGTO14772 594 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 AKAP10O43572 662 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 KERAO60938 352 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 MAPK3P27361 379 aaPredicted RBP9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 GALK1P51570 392 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 GPR85P60893 370 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 GSTM4Q03013 218 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 EZH2Q15910 746 aaKnown RBP9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 EAPPQ56P03 285 aaPredicted RBP9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 PLEKHM3Q6ZWE6 761 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 ZC3H18Q86VM9 953 aaKnown RBP9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 TSPYL6Q8N831 410 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 OR7G1Q8NGA0 311 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 LRRC8CQ8TDW0 803 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 STARD8Q92502 1023 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 NUDT12Q9BQG2 462 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 ZKSCAN3Q9BRR0 538 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 STN1Q9H668 368 aaKnown RBP9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 CEP72Q9P209 647 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 LNPEPQ9UIQ6 1025 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 RTCBQ9Y3I0 505 aaKnown RBP9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 C16orf96A6NNT2 1141 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 E7EVH7 732 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 KCNQ3O43525 872 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 BRINP1O60477 761 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 TFPTP0C1Z6 253 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 KCNA3P22001 575 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 CNTFP26441 200 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 VSIG1Q86XK7 387 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 ZNF565Q8N9K5 539 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 KCNH5Q8NCM2 988 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 OR6P1Q8NGX9 317 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 STMN2Q93045 179 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 RELTQ969Z4 430 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 DYDC2Q96IM9 177 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 CMTM3Q96MX0 182 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 ANKRD27Q96NW4 1050 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 TUBGCP5Q96RT8 1024 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 LLPHQ9BRT6 129 aaKnown RBP9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 NUP85Q9BW27 656 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 RNF38Q9H0F5 515 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 MMRN2Q9H8L6 949 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 TXNDC16Q9P2K2 825 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 FBXL21Q9UKT6 434 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 VPS4AQ9UN37 437 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 DNM3Q9UQ16 869 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 H0YJX3 145 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 AP3D1O14617 1153 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 DNAJB5O75953 348 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 ACCSLQ4AC99 568 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 CEP68Q76N32 757 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 ANKLE2Q86XL3 938 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 ARFGAP2Q8N6H7 521 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 OR8K3Q8NH51 312 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 ATL1Q8WXF7 558 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 RAPGEF4Q8WZA2 1011 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 WASH6PQ9NQA3 447 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 SDHAF3Q9NRP4 125 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 HSPBP1Q9NZL4 362 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 GIT1Q9Y2X7 761 aa9.39□□□□□ -0.91
CTDSPL-201ENST00000273179 SETD1BQ9UPS6 1966 aaKnown RBP9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 NLRP1Q9C000 1473 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 RFC5P40937 340 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 CBLBQ13191 982 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 FAM209AQ5JX71 171 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 DGKKQ5KSL6 1271 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 SIGIRRQ6IA17 410 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 HMBOX1Q6NT76 420 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 AGMOQ6ZNB7 445 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 RUFY4Q6ZNE9 571 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 LUZP2Q86TE4 346 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms