RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 USP15Q9Y4E8 981 aaPredicted RBP17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 COL11A1P12107 1806 aaPredicted RBP17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PHIPQ8WWQ0 1821 aa17.05■□□□□ 0.32
MAP1LC3B-201ENST00000268607 C19orf81C9J6K1 198 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 H2AFZP0C0S5 128 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MSH2P43246 934 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 RANBP1P43487 201 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 GCLCP48506 637 aaPredicted RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PDE6CP51160 858 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 CNGA2Q16280 664 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 GALNTL6Q49A17 601 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ODR4Q5SWX8 454 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 DCAF12L1Q5VU92 463 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ANO7Q6IWH7 933 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 H2AFVQ71UI9 128 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ZC3H3Q8IXZ2 948 aaKnown RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SYTL5Q8TDW5 730 aaPredicted RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PLCD4Q9BRC7 762 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MXRA8Q9BRK3 442 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TEKT3Q9BXF9 490 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PARVGQ9HBI0 331 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TXNRD2Q9NNW7 524 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 LMCD1Q9NZU5 365 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 AMFRQ9UKV5 643 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TELO2Q9Y4R8 837 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 LRRD1A4D1F6 860 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 AGTP01019 485 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 AFPP02771 609 aaKnown RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PDHA1P08559 390 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 HOXA7P31268 230 aaPredicted RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 CYP2J2P51589 502 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PTENP60484 403 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SP4Q02446 784 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 BNIP1Q12981 228 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ZNF211Q13398 564 aaPredicted RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 EXOC3L4Q17RC7 722 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 NOL9Q5SY16 702 aaKnown RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ZDHHC24Q6UX98 284 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 RNF207Q6ZRF8 634 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TRIM74Q86UV6 250 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TRIM73Q86UV7 250 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ZC3H15Q8WU90 426 aaKnown RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 DYDC1Q8WWB3 177 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 AJAP1Q9UKB5 411 aaPredicted RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 C2CD2Q9Y426 696 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 RPTORQ8N122 1335 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 OTOFQ9HC10 1997 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TCP11X1B4DZS4 312 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PLA2G6O60733 806 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 OAS1P00973 400 aaKnown RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 PON1P27169 355 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ZNF131P52739 623 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 CNTN2Q02246 1040 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 USP4Q13107 963 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 Q3C1V9 767 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 C6orf118Q5T5N4 469 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 FRMD5Q7Z6J6 570 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 FAM178BQ8IXR5 827 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SYCE1Q8N0S2 351 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 REPS2Q8NFH8 660 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 U2AF1L4Q8WU68 220 aaKnown RBP17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SLC10A4Q96EP9 437 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 RMDN3Q96TC7 470 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 EHMT1Q9H9B1 1298 aa17.04■□□□□ 0.32
MAP1LC3B-201ENST00000268607 RNF8O76064 485 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 FGFR4P22455 802 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MRPS9P82933 396 aaKnown RBP17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 DPY19L2P1Q6NXN4 242 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ERO1BQ86YB8 467 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SYT15Q9BQS2 421 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ARHGEF3Q9NR81 526 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 STK24Q9Y6E0 443 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 BZW2Q9Y6E2 419 aaKnown RBP17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TESPA1A2RU30 521 aaPredicted RBP17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MTHFD1LQ6UB35 978 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MIER3Q7Z3K6 550 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 KLHL23Q8NBE8 558 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 SLC35C1Q96A29 364 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 MLXIPLQ9NP71 852 aa17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ZMYND8Q9ULU4 1186 aaPredicted RBP17.03■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ARHGEF35A5YM69 484 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TISP43B9A030 160 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 DDX3XO00571 662 aaKnown RBP eCLIP17.02■□□□□ 0.322e-11■■■■■ 29.6
MAP1LC3B-201ENST00000268607 CCNG1P51959 295 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ATP11AP98196 1134 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 GRM1Q13255 1194 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 EPHA7Q15375 998 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 NUGGCQ68CJ6 796 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 OTUD6AQ7L8S5 288 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 EEPD1Q7L9B9 569 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 JAMLQ86YT9 394 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 FITM2Q8N6M3 262 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 TEX9Q8N6V9 391 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 FIZ1Q96SL8 496 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 ASCC2Q9H1I8 757 aaPredicted RBP17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 OLFML3Q9NRN5 406 aa17.02■□□□□ 0.32
MAP1LC3B-201ENST00000268607 GOLGA6L10A0A0M3HER8 536 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms