RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ZNF449Q6P9G9 518 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 TAOK1Q7L7X3 1001 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 PSPC1Q8WXF1 523 aaKnown RBP17.91■□□□□ 0.46
SQLE-201ENST00000265896 KLF6Q99612 283 aaPredicted RBP17.91■□□□□ 0.46
SQLE-201ENST00000265896 FAM167BQ9BTA0 163 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 NINJ2Q9NZG7 142 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 USP15Q9Y4E8 981 aaPredicted RBP17.91■□□□□ 0.46
SQLE-201ENST00000265896 MGRN1O60291 552 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 ANP32DO95626 131 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 P4HBP07237 508 aaKnown RBP17.91■□□□□ 0.46
SQLE-201ENST00000265896 ALDH1B1P30837 517 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 NPTX2P47972 431 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 MGAT5Q09328 741 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 SLMAPQ14BN4 828 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 PARD3BQ8TEW8 1205 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 ZNF668Q96K58 619 aaPredicted RBP17.91■□□□□ 0.46
SQLE-201ENST00000265896 NT5C1BQ96P26 610 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 RAB20Q9NX57 234 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 GGA2Q9UJY4 613 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 DIS3Q9Y2L1 958 aaKnown RBP17.91■□□□□ 0.46
SQLE-201ENST00000265896 MRPL11Q9Y3B7 192 aaKnown RBP17.91■□□□□ 0.46
SQLE-201ENST00000265896 ADGRA3Q8IWK6 1321 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 DHX15O43143 795 aaKnown RBP17.91■□□□□ 0.46
SQLE-201ENST00000265896 CCNE2O96020 404 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 TNNI1P19237 187 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 FOXN2P32314 431 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 DYNLT1P63172 113 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 TKFCQ3LXA3 575 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 ERICH1Q86X53 443 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 TMEM130Q8N3G9 435 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 WNK4Q96J92 1243 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 HOMER3Q9NSC5 361 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 SUFUQ9UMX1 484 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 SLC12A4Q9UP95 1085 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
SQLE-201ENST00000265896 GOLGA8RI6L899 631 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 CDR2Q01850 454 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 GAD2Q05329 585 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 KRT39Q6A163 491 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 CGB2Q6NT52 195 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 ZBTB45Q96K62 511 aaPredicted RBP17.9■□□□□ 0.46
SQLE-201ENST00000265896 STRA6Q9BX79 667 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 ASTN2O75129 1339 aaPredicted RBP17.9■□□□□ 0.46
SQLE-201ENST00000265896 MROH7Q68CQ1 1323 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 RASA4BC9J798 803 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 H0Y3Z8 333 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 ASAP2O43150 1006 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 RASA4O43374 803 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 NRLP54845 237 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 ZBTB41Q5SVQ8 909 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 SLC39A4Q6P5W5 647 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 BTNL9Q6UXG8 535 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 ZNF365Q70YC5 407 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 ANKMY2Q8IV38 441 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 SHC3Q92529 594 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 MASTLQ96GX5 879 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 TMEM206Q9H813 350 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 TMX2Q9Y320 296 aa17.9■□□□□ 0.46
SQLE-201ENST00000265896 GRIN3BO60391 1043 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 DNAJC8O75937 253 aaPredicted RBP17.89■□□□□ 0.45
SQLE-201ENST00000265896 PLCB3Q01970 1234 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 P3H1Q32P28 736 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 SPATA21Q7Z572 469 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 RPS6KC1Q96S38 1066 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 KMT5AQ9NQR1 393 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 TBX20Q9UMR3 447 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 UMODL1Q5DID0 1318 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 SCN9AQ15858 1988 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 TTC4O95801 387 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 TARSP26639 723 aaKnown RBP17.89■□□□□ 0.45
SQLE-201ENST00000265896 DRG2P55039 364 aaKnown RBP17.89■□□□□ 0.45
SQLE-201ENST00000265896 NOP14P78316 857 aaKnown RBP17.89■□□□□ 0.45
SQLE-201ENST00000265896 IZUMO3Q5VZ72 239 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 ARMC9Q7Z3E5 817 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 FBXL13Q8NEE6 735 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 CEP170P1Q96L14 293 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 SAYSD1Q9NPB0 183 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 GTF3C4Q9UKN8 822 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 AFF2P51816 1311 aa17.89■□□□□ 0.45
SQLE-201ENST00000265896 PEX10O60683 326 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 NQO1P15559 274 aaKnown RBP17.88■□□□□ 0.45
SQLE-201ENST00000265896 IVDP26440 423 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 DSG3P32926 999 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 RPL7AP62424 266 aaKnown RBP17.88■□□□□ 0.45
SQLE-201ENST00000265896 RPS6P62753 249 aaKnown RBP17.88■□□□□ 0.45
SQLE-201ENST00000265896 TXNRD3NBQ6F5E7 133 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 TMEM270Q6UE05 265 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 DDX1Q92499 740 aaKnown RBP17.88■□□□□ 0.45
SQLE-201ENST00000265896 CENPTQ96BT3 561 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 PARP2Q9UGN5 583 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 KLRG2A4D1S0 409 aaPredicted RBP17.88■□□□□ 0.45
SQLE-201ENST00000265896 PPP2R5EQ16537 467 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 TRIM68Q6AZZ1 485 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 ACAD10Q6JQN1 1059 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 ANO5Q75V66 913 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 CHURC1Q8WUH1 139 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 SNF8Q96H20 258 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 NSRP1Q9H0G5 558 aaKnown RBP17.88■□□□□ 0.45
SQLE-201ENST00000265896 ETNK1Q9HBU6 452 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 ANKFY1Q9P2R3 1169 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms