RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TRAK2O60296 914 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 N4BP1O75113 896 aaKnown RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 PDGFBP01127 241 aaPredicted RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 IGFBP6P24592 240 aaPredicted RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 GUCY2CP25092 1073 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 AVPR2P30518 371 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 CREMQ03060 361 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 ELAVL2Q12926 359 aaKnown RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 ZRSR1Q15695 479 aaKnown RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 XKR4Q5GH76 650 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 LARP1BQ659C4 914 aaKnown RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 ARL6IP4Q66PJ3 421 aaKnown RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 PRSS55Q6UWB4 352 aaPredicted RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 CD300LGQ6UXG3 332 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 APBB1IPQ7Z5R6 666 aaPredicted RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 CEP57Q86XR8 500 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 GLYCTKQ8IVS8 523 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 LNX1Q8TBB1 728 aaPredicted RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 HASPINQ8TF76 798 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 SPIRE2Q8WWL2 714 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 PIK3R5Q8WYR1 880 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 SMG7Q92540 1137 aaKnown RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 TBC1D32Q96NH3 1257 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 PPP1R10Q96QC0 940 aaKnown RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 TIPINQ9BVW5 301 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 TARS2Q9BW92 718 aaKnown RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 MRPL4Q9BYD3 311 aaKnown RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 KCNK12Q9HB15 430 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 KMT5AQ9NQR1 393 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.68□□□□□ -0.7
VPS41-201ENST00000265745 KCNG1Q9UIX4 513 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 SMC3Q9UQE7 1217 aa10.68□□□□□ -0.7
VPS41-201ENST00000265745 PHLPP2Q6ZVD8 1323 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 VWA3AA6NCI4 1184 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 TMEM189-UBE2V1I3L0A0 370 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 ABLIM1O14639 778 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 SLC16A4O15374 487 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 B3GAT3O94766 335 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 PLS3P13797 630 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 PROZP22891 400 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 GRM5P41594 1212 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 SLC12A3P55017 1021 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 VCPP55072 806 aaKnown RBP10.67□□□□□ -0.7
VPS41-201ENST00000265745 UPP1Q16831 310 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 GLRA4Q5JXX5 417 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 C6orf132Q5T0Z8 1188 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 DCLRE1AQ6PJP8 1040 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 CEP120Q8N960 986 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 SYT2Q8N9I0 419 aaPredicted RBP10.67□□□□□ -0.7
VPS41-201ENST00000265745 TMEM161BQ8NDZ6 487 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 PRSS33Q8NF86 280 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 PLIN2Q99541 437 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 PRRX2Q99811 253 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 PRKD2Q9BZL6 878 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 CDT1Q9H211 546 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 ZDHHC7Q9NXF8 308 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 KCND2Q9NZV8 630 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.67□□□□□ -0.7
VPS41-201ENST00000265745 ADGRG1Q9Y653 693 aa10.67□□□□□ -0.7
VPS41-201ENST00000265745 ADAM12O43184 909 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 PLA2G4BP0C869 781 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 MCF2P10911 925 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 FGFR3P22607 806 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 CLCNKBP51801 687 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 YARSP54577 528 aaKnown RBP10.66□□□□□ -0.7
VPS41-201ENST00000265745 OSTNP61366 133 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 SOX4Q06945 474 aaPredicted RBP10.66□□□□□ -0.7
VPS41-201ENST00000265745 RAD51AP2Q09MP3 1159 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 TCF15Q12870 199 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 TDGQ13569 410 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 PSMD5Q16401 504 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 ZNF568Q3ZCX4 644 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 TMEM119Q4V9L6 283 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 ARSHQ5FYA8 562 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 PDXDC1Q6P996 788 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 MPZL3Q6UWV2 235 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.66□□□□□ -0.7
VPS41-201ENST00000265745 ALYREFQ86V81 257 aaKnown RBP10.66□□□□□ -0.7
VPS41-201ENST00000265745 STAMQ92783 540 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 AK8Q96MA6 479 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 UROC1Q96N76 676 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 ZMAT2Q96NC0 199 aaKnown RBP10.66□□□□□ -0.7
VPS41-201ENST00000265745 ACAP3Q96P50 834 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 TCHPQ9BT92 498 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 CCDC94Q9BW85 323 aaPredicted RBP10.66□□□□□ -0.7
VPS41-201ENST00000265745 PIDD1Q9HB75 910 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 TOPORSQ9NS56 1045 aaPredicted RBP10.66□□□□□ -0.7
VPS41-201ENST00000265745 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.66□□□□□ -0.7
VPS41-201ENST00000265745 IGSF9Q9P2J2 1179 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 EPS15L1Q9UBC2 864 aa10.66□□□□□ -0.7
VPS41-201ENST00000265745 CLUHO75153 1309 aa10.65□□□□□ -0.7
VPS41-201ENST00000265745 CACNA1HO95180 2353 aa10.65□□□□□ -0.7
VPS41-201ENST00000265745 NPHP3-ACAD11A0A0J9YXS1 232 aa10.65□□□□□ -0.7
VPS41-201ENST00000265745 MEFVO15553 781 aaPredicted RBP10.65□□□□□ -0.7
VPS41-201ENST00000265745 SLC26A4O43511 780 aa10.65□□□□□ -0.7
VPS41-201ENST00000265745 TRAPPC3O43617 180 aa10.65□□□□□ -0.7
VPS41-201ENST00000265745 TOM1L1O75674 476 aa10.65□□□□□ -0.7
VPS41-201ENST00000265745 MAPTP10636 758 aaKnown RBP10.65□□□□□ -0.7
VPS41-201ENST00000265745 KCNE1P15382 129 aa10.65□□□□□ -0.7
VPS41-201ENST00000265745 GBP2P32456 591 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms