RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 ANKRD13DQ6ZTN6 518 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 PTF1AQ7RTS3 328 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 USP38Q8NB14 1042 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 PYROXD1Q8WU10 500 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 DHRS1Q96LJ7 313 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 ROPN1BQ9BZX4 212 aaPredicted RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 ROPN1Q9HAT0 212 aaPredicted RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 EXOC7Q9UPT5 735 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 PCDHGA4Q9Y5G9 962 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 DUSP10Q9Y6W6 482 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 NPHP3-ACAD11A0A0J9YXS1 232 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 A8MXQ7 604 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 BBS9Q3SYG4 887 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 PASD1Q8IV76 773 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 ZNF444Q8N0Y2 327 aaPredicted RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 CMTR1Q8N1G2 835 aaKnown RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 ENGASEQ8NFI3 743 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 INPP5DQ92835 1189 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 PTPRN2Q92932 1015 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 AIFM3Q96NN9 605 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 GPATCH1Q9BRR8 931 aaKnown RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 DSCC1Q9BVC3 393 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 TRPV5Q9NQA5 729 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 RPRD1BQ9NQG5 326 aaKnown RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 CTNNAL1Q9UBT7 734 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 MARCOQ9UEW3 520 aaPredicted RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 SESN1Q9Y6P5 492 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 FAM25AB3EWG3 89 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 FAM25CB3EWG5 89 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 FAM25GB3EWG6 89 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 BOLA2-SMG1P6H3BVE0 249 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 BAG3O95817 575 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 CHRNA3P32297 505 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 POTEAQ6S8J7 498 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 PRPF39Q86UA1 669 aaKnown RBP11.23□□□□□ -0.61
KPNA3-201ENST00000261667 RSPH1Q8WYR4 309 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 BTBD10Q9BSF8 475 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 SENP1Q9P0U3 644 aa11.23□□□□□ -0.61
KPNA3-201ENST00000261667 GOLGA8MH3BSY2 632 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 CALUO43852 315 aaPredicted RBP11.22□□□□□ -0.61
KPNA3-201ENST00000261667 PMLP29590 882 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 PIK3CAP42336 1068 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 LRRC63Q05C16 580 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 DHX34Q14147 1143 aaKnown RBP11.22□□□□□ -0.61
KPNA3-201ENST00000261667 SHC4Q6S5L8 630 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 CEP295NLQ96MC4 621 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 NUP85Q9BW27 656 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 PTTG2Q9NZH5 202 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 SHANK3Q9BYB0 1731 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 LINC00854A0A1B0GVQ3 168 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 A0A1W2PQC6 194 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 LPXNO60711 386 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 RTN2O75298 545 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 WFS1O76024 890 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 SHBGP04278 402 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 TRIM49P0CI25 452 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 TRIM49CP0CI26 452 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 NR1H2P55055 460 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 KRR1Q13601 381 aaKnown RBP11.22□□□□□ -0.61
KPNA3-201ENST00000261667 STAT4Q14765 748 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 BSPRYQ5W0U4 402 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 CCDC137Q6PK04 289 aaKnown RBP11.22□□□□□ -0.61
KPNA3-201ENST00000261667 GABPB2Q8TAK5 448 aaPredicted RBP11.22□□□□□ -0.61
KPNA3-201ENST00000261667 LRRC39Q96DD0 335 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 MAGEB18Q96M61 343 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 C6orf50Q9HD87 102 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 AGPAT5Q9NUQ2 364 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 RSL24D1Q9UHA3 163 aaKnown RBP11.22□□□□□ -0.61
KPNA3-201ENST00000261667 BAG5Q9UL15 447 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 ZBTB1Q9Y2K1 713 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 SRPRBQ9Y5M8 271 aaKnown RBP11.22□□□□□ -0.61
KPNA3-201ENST00000261667 LOC100653049A0A140TA62 436 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 KRT34O76011 436 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 MAGEA10P43363 369 aaPredicted RBP11.22□□□□□ -0.61
KPNA3-201ENST00000261667 RTP1P59025 263 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 ZNF200P98182 395 aaPredicted RBP11.22□□□□□ -0.61
KPNA3-201ENST00000261667 PLS1Q14651 629 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 ERMARDQ5T6L9 678 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 QKIQ96PU8 341 aaKnown RBP eCLIP11.22□□□□□ -0.619e-14■■■■■ 56.2
KPNA3-201ENST00000261667 LACRTQ9GZZ8 138 aa11.22□□□□□ -0.61
KPNA3-201ENST00000261667 DIS3Q9Y2L1 958 aaKnown RBP11.22□□□□□ -0.61
KPNA3-201ENST00000261667 CACNA1FO60840 1977 aa11.21□□□□□ -0.61
KPNA3-201ENST00000261667 C16orf96A6NNT2 1141 aa11.21□□□□□ -0.61
KPNA3-201ENST00000261667 TSPAN4O14817 238 aa11.21□□□□□ -0.61
KPNA3-201ENST00000261667 PFDN6O15212 129 aa11.21□□□□□ -0.61
KPNA3-201ENST00000261667 GNAQP50148 359 aa11.21□□□□□ -0.61
KPNA3-201ENST00000261667 MAPK10P53779 464 aa11.21□□□□□ -0.61
KPNA3-201ENST00000261667 HSPA2P54652 639 aa11.21□□□□□ -0.61
KPNA3-201ENST00000261667 ARPP19P56211 112 aa11.21□□□□□ -0.61
KPNA3-201ENST00000261667 ZNF589Q86UQ0 364 aaPredicted RBP11.21□□□□□ -0.61
KPNA3-201ENST00000261667 CENPOQ9BU64 300 aa11.21□□□□□ -0.61
KPNA3-201ENST00000261667 PARP4Q9UKK3 1724 aaKnown RBP11.21□□□□□ -0.61
KPNA3-201ENST00000261667 SYNGAP1Q96PV0 1343 aa11.21□□□□□ -0.61
KPNA3-201ENST00000261667 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms