RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 PCDHA10Q9Y5I2 948 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 ANKRD62A6NC57 917 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 ZNF862O60290 1169 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 GTF2A2P52657 109 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 SOX10P56693 466 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 ACTR2P61160 394 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 ITIH4Q14624 930 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 CBWD6Q4V339 395 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 CBWD3Q5JTY5 395 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 CBWD5Q5RIA9 395 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 TMEM63BQ5T3F8 832 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 SPRYD7Q5W111 196 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 PALB2Q86YC2 1186 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 CCDC60Q8IWA6 550 aaPredicted RBP18.18■□□□□ 0.5
FOXA1-201ENST00000250448 DAW1Q8N136 415 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 IWS1Q96ST2 819 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 SLC25A27O95847 323 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 ITGBL1O95965 494 aaPredicted RBP18.17■□□□□ 0.5
FOXA1-201ENST00000250448 C18orf8Q96DM3 657 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.17■□□□□ 0.5
FOXA1-201ENST00000250448 APEX2Q9UBZ4 518 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 MGRN1O60291 552 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 AGTP01019 485 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 TRIM49P0CI25 452 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 TRIM49CP0CI26 452 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 HSPA6P17066 643 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 JAK3P52333 1124 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 PSMC5P62195 406 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 ADCY2Q08462 1091 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 SLC29A2Q14542 456 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 LY6KQ17RY6 165 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 XKR9Q5GH70 373 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 AADACL2Q6P093 401 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 LRRC34Q8IZ02 419 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 ODF2LQ9ULJ1 636 aa18.17■□□□□ 0.5
FOXA1-201ENST00000250448 GSTA1P08263 222 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 CHRNA3P32297 505 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 ELF1P32519 619 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 IFI35P80217 286 aaPredicted RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 MYL7Q01449 175 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 ODR4Q5SWX8 454 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 ANO5Q75V66 913 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 PIGWQ7Z7B1 504 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 CROCCP2Q86T23 111 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 RHOT2Q8IXI1 618 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 UBA1P22314 1058 aaKnown RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 GBP1P32455 592 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 RPL21P46778 160 aaKnown RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 ELF3P78545 371 aaPredicted RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 KIF22Q14807 665 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 ARHGAP44Q17R89 818 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 C6orf118Q5T5N4 469 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 CHADLQ6NUI6 762 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 C11orf63Q6NUN7 778 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 ZNF746Q6NUN9 644 aaPredicted RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 FBXO16Q8IX29 292 aaPredicted RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 PARVGQ9HBI0 331 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 INTS9Q9NV88 658 aaKnown RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 MTRF1LQ9UGC7 380 aaKnown RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 PNMA3Q9UL41 463 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 TRPC6Q9Y210 931 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 MYH11P35749 1972 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 MIF4GDA9UHW6 222 aaKnown RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 SOCS7O14512 581 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 MAFGO15525 162 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 ARIH2O95376 493 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 KCNA4P22459 653 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 SFNP31947 248 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 SLC8A1P32418 973 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 CYP2J2P51589 502 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 HADHBP55084 474 aaKnown RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 UBL4BQ8N7F7 174 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 PRELID2Q8N945 189 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 PARP2Q9UGN5 583 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 SLC12A4Q9UP95 1085 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 ALG6Q9Y672 507 aa18.16■□□□□ 0.5
FOXA1-201ENST00000250448 ZNFX1Q9P2E3 1918 aaKnown RBP18.16■□□□□ 0.5
FOXA1-201ENST00000250448 UBE4BO95155 1302 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 EZRP15311 586 aaKnown RBP18.15■□□□□ 0.5
FOXA1-201ENST00000250448 IBSPP21815 317 aaPredicted RBP18.15■□□□□ 0.5
FOXA1-201ENST00000250448 TMEM132AQ24JP5 1023 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 NBPF20Q3BBV1 942 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 UBAP2Q5T6F2 1119 aaKnown RBP18.15■□□□□ 0.5
FOXA1-201ENST00000250448 GPRC5AQ8NFJ5 357 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 SEMA4AQ9H3S1 761 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 CCDC134Q9H6E4 229 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 SAMD15Q9P1V8 674 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 PCYOX1Q9UHG3 505 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 CEP83Q9Y592 693 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 WDR81Q562E7 1941 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 MUTP22033 750 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 EDNRBP24530 442 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 MARCKSL1P49006 195 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 FKBP1BP68106 108 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 HS2ST1Q7LGA3 356 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 EPS8L3Q8TE67 593 aaKnown RBP18.15■□□□□ 0.5
FOXA1-201ENST00000250448 KRT35Q92764 455 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 CDHR1Q96JP9 859 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 AGPAT1Q99943 283 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 TMEM109Q9BVC6 243 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms