RNA–Protein interactions for RNA: ENST00000233330.6

RTKN-201, Transcript of rhotekin, humanhuman

TSL 1 (best) BASIC

Gene RTKN, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-201ENST00000233330 MMP19Q99542 508 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 APOBEC3GQ9HC16 384 aaKnown RBP21.12■□□□□ 0.97
RTKN-201ENST00000233330 ERVK-5Q9HDB9 667 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 GOLGA6L10A0A0M3HER8 536 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 TTLL13PA6NNM8 815 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 GOLGA8KD6RF30 607 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 MSCO60682 206 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 HSPA9P38646 679 aaKnown RBP21.12■□□□□ 0.97
RTKN-201ENST00000233330 EFNA5P52803 228 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 IER5Q5VY09 327 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 C9orf131Q5VYM1 1079 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 AADACL2Q6P093 401 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 ADAT2Q7Z6V5 191 aaKnown RBP21.12■□□□□ 0.97
RTKN-201ENST00000233330 CCDC113Q9H0I3 377 aa21.12■□□□□ 0.97
RTKN-201ENST00000233330 CNOT8Q9UFF9 292 aaKnown RBP21.12■□□□□ 0.97
RTKN-201ENST00000233330 GOLGA6CA6NDK9 693 aa21.11■□□□□ 0.97
RTKN-201ENST00000233330 ZBTB42B2RXF5 422 aa21.11■□□□□ 0.97
RTKN-201ENST00000233330 NOP56O00567 594 aaKnown RBP21.11■□□□□ 0.97
RTKN-201ENST00000233330 GOLGA6DP0CG33 693 aa21.11■□□□□ 0.97
RTKN-201ENST00000233330 ACO1P21399 889 aaKnown RBP21.11■□□□□ 0.97
RTKN-201ENST00000233330 OSBPP22059 807 aa21.11■□□□□ 0.97
RTKN-201ENST00000233330 MKRN4PQ13434 485 aaPredicted RBP21.11■□□□□ 0.97
RTKN-201ENST00000233330 CUL2Q13617 745 aa21.11■□□□□ 0.97
RTKN-201ENST00000233330 CFAP58Q5T655 872 aa21.11■□□□□ 0.97
RTKN-201ENST00000233330 CDCA2Q69YH5 1023 aaPredicted RBP21.11■□□□□ 0.97
RTKN-201ENST00000233330 USP50Q70EL3 339 aaPredicted RBP21.11■□□□□ 0.97
RTKN-201ENST00000233330 PIK3R5Q8WYR1 880 aa21.11■□□□□ 0.97
RTKN-201ENST00000233330 GOLGA6AQ9NYA3 693 aa21.11■□□□□ 0.97
RTKN-201ENST00000233330 CLDN3O15551 220 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 HARSP12081 509 aaKnown RBP21.1■□□□□ 0.97
RTKN-201ENST00000233330 CTNNA1P35221 906 aaKnown RBP21.1■□□□□ 0.97
RTKN-201ENST00000233330 BPIFB4P59827 614 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 PPFIA1Q13136 1202 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 SEZ6Q53EL9 994 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 GPAT2Q6NUI2 795 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 FASTKD5Q7L8L6 764 aaKnown RBP21.1■□□□□ 0.97
RTKN-201ENST00000233330 PLPPR4Q7Z2D5 763 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 FBXO16Q8IX29 292 aaPredicted RBP21.1■□□□□ 0.97
RTKN-201ENST00000233330 OR5B17Q8NGF7 314 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 ATP8B4Q8TF62 1192 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 NEUROG2Q9H2A3 272 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 IGKV6-21A0A0C4DH24 114 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 DAPK3O43293 454 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 GAS2O43903 313 aaKnown RBP21.1■□□□□ 0.97
RTKN-201ENST00000233330 FAM189A1O60320 539 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 CAPN2P17655 700 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 CCDC62Q6P9F0 684 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 CPNE8Q86YQ8 564 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 ZC3H15Q8WU90 426 aaKnown RBP21.1■□□□□ 0.97
RTKN-201ENST00000233330 TCP11Q8WWU5 503 aa21.1■□□□□ 0.97
RTKN-201ENST00000233330 MRPL4Q9BYD3 311 aaKnown RBP21.1■□□□□ 0.97
RTKN-201ENST00000233330 UTP11Q9Y3A2 253 aaKnown RBP21.1■□□□□ 0.97
RTKN-201ENST00000233330 CCDC66A2RUB6 948 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 SPOPO43791 374 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 YBX3P16989 372 aaKnown RBP eCLIP21.09■□□□□ 0.97
RTKN-201ENST00000233330 HSPA6P17066 643 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 CTNNA2P26232 953 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 LAMTOR4Q0VGL1 99 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 MXD4Q14582 209 aaPredicted RBP21.09■□□□□ 0.97
RTKN-201ENST00000233330 KCTD19Q17RG1 926 aaPredicted RBP21.09■□□□□ 0.97
RTKN-201ENST00000233330 BRSK2Q8IWQ3 736 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 FAM76AQ8TAV0 307 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 TOM1L1O75674 476 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 CLTAP09496 248 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 PLCB4Q15147 1175 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 SEL1L2Q5TEA6 688 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 MCOLN2Q8IZK6 566 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 LRRC71Q8N4P6 559 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 L3MBTL3Q96JM7 780 aaPredicted RBP21.09■□□□□ 0.97
RTKN-201ENST00000233330 SPATA33Q96N06 139 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 MROH8Q9H579 483 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 PCDHA3Q9Y5H8 950 aa21.09■□□□□ 0.97
RTKN-201ENST00000233330 CYP1A1P04798 512 aaPredicted RBP21.08■□□□□ 0.97
RTKN-201ENST00000233330 SRGAP2CP0DJJ0 459 aa21.08■□□□□ 0.97
RTKN-201ENST00000233330 TNFSF9P41273 254 aa21.08■□□□□ 0.97
RTKN-201ENST00000233330 NOP14P78316 857 aaKnown RBP21.08■□□□□ 0.97
RTKN-201ENST00000233330 DR1Q01658 176 aa21.08■□□□□ 0.97
RTKN-201ENST00000233330 TTMPQ5BVD1 217 aa21.08■□□□□ 0.97
RTKN-201ENST00000233330 DHX37Q8IY37 1157 aaKnown RBP21.08■□□□□ 0.97
RTKN-201ENST00000233330 EXOC8Q8IYI6 725 aa21.08■□□□□ 0.97
RTKN-201ENST00000233330 RNF149Q8NC42 400 aa21.08■□□□□ 0.97
RTKN-201ENST00000233330 ARL8AQ96BM9 186 aa21.08■□□□□ 0.97
RTKN-201ENST00000233330 ACO2Q99798 780 aaKnown RBP21.08■□□□□ 0.97
RTKN-201ENST00000233330 TRIM51Q9BSJ1 452 aa21.08■□□□□ 0.97
RTKN-201ENST00000233330 AVENQ9NQS1 362 aaPredicted RBP21.08■□□□□ 0.97
RTKN-201ENST00000233330 FAM114A2Q9NRY5 505 aa21.08■□□□□ 0.97
RTKN-201ENST00000233330 NUB1Q9Y5A7 615 aa21.08■□□□□ 0.97
RTKN-201ENST00000233330 KRT14P02533 472 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 PYGMP11217 842 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 TBXAS1P24557 533 aaPredicted RBP21.08■□□□□ 0.96
RTKN-201ENST00000233330 EPHX2P34913 555 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 CENPCQ03188 943 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 NCOA4Q13772 614 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 WDR78Q5VTH9 848 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 ZBTB8OSQ8IWT0 167 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 CD302Q8IX05 232 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 CPA5Q8WXQ8 436 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 COPS5Q92905 334 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 RAB17Q9H0T7 212 aa21.08■□□□□ 0.96
RTKN-201ENST00000233330 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms