RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 DUSP6Q16828 381 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 KMT5BQ4FZB7 885 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 SLFN12LQ6IEE8 588 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 FUT10Q6P4F1 479 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 KRBA2Q6ZNG9 492 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 EPM2AIP1Q7L775 607 aaPredicted RBP13.82□□□□□ -0.2
LSM5-201ENST00000223084 NELFCDQ8IXH7 590 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 POMGNT1Q8WZA1 660 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 PPP2R3CQ969Q6 453 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 PABPC5Q96DU9 382 aaKnown RBP13.82□□□□□ -0.2
LSM5-201ENST00000223084 FAM212AQ96EL1 285 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 B3GALT6Q96L58 329 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 HERC2P3Q9BVR0 1158 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 RPF1Q9H9Y2 349 aaKnown RBP13.82□□□□□ -0.2
LSM5-201ENST00000223084 SLC39A2Q9NP94 309 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 CPSF3Q9UKF6 684 aaKnown RBP13.82□□□□□ -0.2
LSM5-201ENST00000223084 ADAM28Q9UKQ2 775 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 AGO2Q9UKV8 859 aaKnown RBP13.82□□□□□ -0.2
LSM5-201ENST00000223084 COG5Q9UP83 839 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 PDCD11Q14690 1871 aaKnown RBP13.82□□□□□ -0.2
LSM5-201ENST00000223084 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.81□□□□□ -0.2
LSM5-201ENST00000223084 TTC26A0AVF1 554 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 GLP2RO95838 553 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 SOD2P04179 222 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 MRPS5P82675 430 aaKnown RBP13.81□□□□□ -0.2
LSM5-201ENST00000223084 PTPN14Q15678 1187 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 CLUL1Q15846 466 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 KYAT1Q16773 422 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 CTC1Q2NKJ3 1217 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 LLGL2Q6P1M3 1020 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 CD300LGQ6UXG3 332 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 CRELD2Q6UXH1 353 aaPredicted RBP13.81□□□□□ -0.2
LSM5-201ENST00000223084 STXBP4Q6ZWJ1 553 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 RNF168Q8IYW5 571 aaPredicted RBP13.81□□□□□ -0.2
LSM5-201ENST00000223084 FMR1NBQ8N0W7 255 aaPredicted RBP13.81□□□□□ -0.2
LSM5-201ENST00000223084 EFHBQ8N7U6 833 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 VN1R2Q8NFZ6 395 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 ATXN2LQ8WWM7 1075 aaKnown RBP13.81□□□□□ -0.2
LSM5-201ENST00000223084 SAAL1Q96ER3 474 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 KIF12Q96FN5 646 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 ASB2Q96Q27 587 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 CBWD1Q9BRT8 395 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 PCIF1Q9H4Z3 704 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 TMEM206Q9H813 350 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 TUBGCP4Q9UGJ1 667 aa13.81□□□□□ -0.2
LSM5-201ENST00000223084 GOLGA8IPA6NC78 632 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 GOLGA8JA6NMD2 632 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 TULP1O00294 542 aaPredicted RBP13.8□□□□□ -0.2
LSM5-201ENST00000223084 PODXLO00592 558 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 EIF3DO15371 548 aaKnown RBP eCLIP13.8□□□□□ -0.2
LSM5-201ENST00000223084 NCK2O43639 380 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 CLASP2O75122 1294 aaKnown RBP13.8□□□□□ -0.2
LSM5-201ENST00000223084 GADD45BO75293 160 aaPredicted RBP13.8□□□□□ -0.2
LSM5-201ENST00000223084 TBX10O75333 385 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 B3GAT3O94766 335 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 RPN1P04843 607 aaKnown RBP13.8□□□□□ -0.2
LSM5-201ENST00000223084 NDUFV1P49821 464 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 GUCY2FP51841 1108 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 PPP2R3AQ06190 1150 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 STK4Q13043 487 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 BMS1Q14692 1282 aaKnown RBP13.8□□□□□ -0.2
LSM5-201ENST00000223084 POSTNQ15063 836 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 UPP1Q16831 310 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 C3orf58Q8NDZ4 430 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 ZNF507Q8TCN5 953 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 NOC3LQ8WTT2 800 aaKnown RBP13.8□□□□□ -0.2
LSM5-201ENST00000223084 SCFD1Q8WVM8 642 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 FAM213AQ9BRX8 229 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 PLEKHA5Q9HAU0 1116 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 EXOC1Q9NV70 894 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 SLC38A7Q9NVC3 462 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 BARX2Q9UMQ3 279 aaPredicted RBP13.8□□□□□ -0.2
LSM5-201ENST00000223084 ANK1P16157 1881 aa13.8□□□□□ -0.2
LSM5-201ENST00000223084 I3L4J1 428 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 LILRB3O75022 631 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 URODP06132 367 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 ADRB2P07550 413 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 NFICP08651 508 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 GARTP22102 1010 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 BRCC3P46736 316 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 GLUD2P49448 558 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 WNT7BP56706 349 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 DPYDQ12882 1025 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
LSM5-201ENST00000223084 KIAA0319Q5VV43 1072 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 JADE1Q6IE81 842 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 KIAA1841Q6NSI8 718 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 ARMCX5Q6P1M9 558 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 DCLRE1AQ6PJP8 1040 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 TMEM87AQ8NBN3 555 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 KIAA0895Q8NCT3 520 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 ENGASEQ8NFI3 743 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.79□□□□□ -0.2
LSM5-201ENST00000223084 UROC1Q96N76 676 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 CDCA3Q99618 268 aaPredicted RBP13.79□□□□□ -0.2
LSM5-201ENST00000223084 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 MRPL17Q9NRX2 175 aaKnown RBP13.79□□□□□ -0.2
LSM5-201ENST00000223084 CLEC1BQ9P126 229 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 IRAK3Q9Y616 596 aa13.79□□□□□ -0.2
LSM5-201ENST00000223084 VWA8A3KMH1 1905 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms