RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 DNAJC6O75061 913 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 LMNB2Q03252 620 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 THEMIS2Q5TEJ8 643 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 FRA10AC1Q70Z53 315 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 OTOP2Q7RTS6 562 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 RIN2Q8WYP3 895 aaPredicted RBP14.59□□□□□ -0.07
SIX4-201ENST00000216513 HIPK3Q9H422 1215 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 EPB41L5Q9HCM4 733 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 RCOR1Q9UKL0 485 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 ATP8A1Q9Y2Q0 1164 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 PPLO60437 1756 aa14.58□□□□□ -0.07
SIX4-201ENST00000216513 WEE2P0C1S8 567 aa14.58□□□□□ -0.07
SIX4-201ENST00000216513 ADAM2Q99965 735 aa14.58□□□□□ -0.07
SIX4-201ENST00000216513 TRPV2Q9Y5S1 764 aa14.58□□□□□ -0.07
SIX4-201ENST00000216513 XYLBO75191 536 aa14.58□□□□□ -0.07
SIX4-201ENST00000216513 SYN1P17600 705 aa14.58□□□□□ -0.07
SIX4-201ENST00000216513 EIF4A3P38919 411 aaKnown RBP14.58□□□□□ -0.07
SIX4-201ENST00000216513 ZNF280DQ6N043 979 aa14.58□□□□□ -0.07
SIX4-201ENST00000216513 CHSY1Q86X52 802 aa14.58□□□□□ -0.07
SIX4-201ENST00000216513 FBXO32Q969P5 355 aa14.58□□□□□ -0.07
SIX4-201ENST00000216513 CYB561D2O14569 222 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 SERPING1P05155 500 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 AKAP5P24588 427 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 RCN2Q14257 317 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 SNRNP35Q16560 246 aaKnown RBP14.58□□□□□ -0.08
SIX4-201ENST00000216513 SZRD1Q7Z422 152 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 MAP10Q9P2G4 905 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 SLC25A13Q9UJS0 675 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 INTUQ9ULD6 942 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 TTC36A6NLP5 189 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 PRCPP42785 496 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 PLTPP55058 493 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 PDIA5Q14554 519 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 GRIK5Q16478 980 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 MIB1Q86YT6 1006 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 PHF20Q9BVI0 1012 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 ATXN3LQ9H3M9 355 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 ANKEF1Q9NU02 776 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 ADGRB2O60241 1585 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 PASKQ96RG2 1323 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 TPI1P60174 286 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 SGSM1Q2NKQ1 1148 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 TCP11X2Q5H9J9 407 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 TAF2Q6P1X5 1199 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 RDM1Q8NG50 284 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 UBA3Q8TBC4 463 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 NDFIP2Q9NV92 336 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 SALL1Q9NSC2 1324 aa14.58□□□□□ -0.08
SIX4-201ENST00000216513 MED1Q15648 1581 aaPredicted RBP14.58□□□□□ -0.08
SIX4-201ENST00000216513 EIF4E1BA6NMX2 242 aaKnown RBP14.57□□□□□ -0.08
SIX4-201ENST00000216513 GAS2O43903 313 aaKnown RBP14.57□□□□□ -0.08
SIX4-201ENST00000216513 ARHGEF7Q14155 803 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 NAALADL2Q58DX5 795 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 RIOX2Q8IUF8 465 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 GRAP2O75791 330 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 ESRRBO95718 433 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 FBXW4P57775 412 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 C10orf76Q5T2E6 689 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 DCUN1D1Q96GG9 259 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 HEMGNQ9BXL5 484 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 CIPCQ9C0C6 399 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 CNTNAP5Q8WYK1 1306 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 KIAA0391O15091 583 aaKnown RBP14.57□□□□□ -0.08
SIX4-201ENST00000216513 EGFRP00533 1210 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 DLK2Q6UY11 383 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 SLC7A14Q8TBB6 771 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 PGLYRP2Q96PD5 576 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 MRPL9Q9BYD2 267 aaKnown RBP14.57□□□□□ -0.08
SIX4-201ENST00000216513 EDEM3Q9BZQ6 932 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 A1CFQ9NQ94 594 aaKnown RBP14.57□□□□□ -0.08
SIX4-201ENST00000216513 TIMM13Q9Y5L4 95 aaPredicted RBP14.57□□□□□ -0.08
SIX4-201ENST00000216513 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.57□□□□□ -0.08
SIX4-201ENST00000216513 H3BRJ5 948 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 NCK2O43639 380 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 RNASEH1O60930 286 aaKnown RBP14.57□□□□□ -0.08
SIX4-201ENST00000216513 INHAP05111 366 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 PNPLA4P41247 253 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 ANKRD23Q86SG2 305 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 NT5C1AQ9BXI3 368 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 MLXIPLQ9NP71 852 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 CLCA2Q9UQC9 943 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 INHBAP08476 426 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 FAM200BP0CF97 657 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 HSD17B4P51659 736 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 LBX1P52954 281 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 GOLGA7BQ2TAP0 167 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 FAF2Q96CS3 445 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 EPAS1Q99814 870 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 CAPN7Q9Y6W3 813 aa14.57□□□□□ -0.08
SIX4-201ENST00000216513 E5RI56 91 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 DDHD2O94830 711 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 ATP2C1P98194 919 aaPredicted RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 CCDC15Q0P6D6 951 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 ITIH5Q86UX2 942 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 PABPC5Q96DU9 382 aaKnown RBP14.56□□□□□ -0.08
SIX4-201ENST00000216513 KLRG1Q96E93 195 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 SNTG2Q9NY99 539 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 TRPM5Q9NZQ8 1165 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 PPME1Q9Y570 386 aa14.56□□□□□ -0.08
SIX4-201ENST00000216513 TMED2Q15363 201 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms