RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 MYH7P12883 1935 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 C3orf70A6NLC5 250 aaPredicted RBP13.22□□□□□ -0.29
LMCD1-201ENST00000157600 DAB2IPQ5VWQ8 1189 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
LMCD1-201ENST00000157600 KIDINS220Q9ULH0 1771 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 SYF2O95926 243 aaKnown RBP13.22□□□□□ -0.29
LMCD1-201ENST00000157600 FOXO4P98177 505 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 SPATA21Q7Z572 469 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 LINC00523Q86TU6 105 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 ADSSL1Q8N142 457 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 EIF3HO15372 352 aaKnown RBP eCLIP13.22□□□□□ -0.29
LMCD1-201ENST00000157600 DTNBO60941 627 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 SLC4A1P02730 911 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 MDH1P40925 334 aaKnown RBP13.22□□□□□ -0.29
LMCD1-201ENST00000157600 CYFIP1Q7L576 1253 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 WARS2Q9UGM6 360 aaKnown RBP13.22□□□□□ -0.29
LMCD1-201ENST00000157600 USP15Q9Y4E8 981 aaPredicted RBP13.22□□□□□ -0.29
LMCD1-201ENST00000157600 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.22□□□□□ -0.29
LMCD1-201ENST00000157600 NEUROG2Q9H2A3 272 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 PAK5Q9P286 719 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 FAM47EQ6ZV65 393 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 FAM49AQ9H0Q0 323 aaPredicted RBP13.21□□□□□ -0.29
LMCD1-201ENST00000157600 TMEM8AQ9HCN3 771 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 TUBE1Q9UJT0 475 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 FBXL5Q9UKA1 691 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 ZNF609O15014 1411 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 PRAMEF22A3QJZ6 481 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 SRGAP2O75044 1071 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 ZNF235Q14590 738 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 PASD1Q8IV76 773 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 CARD9Q9H257 536 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 SMARCAD1Q9H4L7 1026 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 EIF3EP60228 445 aaKnown RBP13.21□□□□□ -0.29
LMCD1-201ENST00000157600 FLOT2Q14254 428 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 SNX17Q15036 470 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 HHIPL2Q6UWX4 724 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 RANBP17Q9H2T7 1088 aaKnown RBP13.21□□□□□ -0.29
LMCD1-201ENST00000157600 TRABDQ9H4I3 376 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 A0A1B0GW55 424 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 DUX4L2P0CJ85 424 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 DUX4L3P0CJ86 424 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 DUX4L4P0CJ87 422 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 DUX4L5P0CJ88 424 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 DUX4L6P0CJ89 424 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 DUX4L7P0CJ90 424 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 DTX3LQ8TDB6 740 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 ANKRD27Q96NW4 1050 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 MTMR4Q9NYA4 1195 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 DUX4Q9UBX2 424 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 SUPT3HO75486 399 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 NEK2P51955 445 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 TPI1P60174 286 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 NSUN4Q96CB9 384 aaKnown RBP13.21□□□□□ -0.29
LMCD1-201ENST00000157600 RIT2Q99578 217 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 NAT9Q9BTE0 207 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 DDX47Q9H0S4 455 aaKnown RBP13.21□□□□□ -0.29
LMCD1-201ENST00000157600 PLEKHA5Q9HAU0 1116 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 SMARCAL1Q9NZC9 954 aa13.21□□□□□ -0.29
LMCD1-201ENST00000157600 PSTPIP1O43586 416 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 ZNF555Q8NEP9 628 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 RAPGEF5Q92565 580 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 HINFPQ9BQA5 517 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 SMYD3Q9H7B4 428 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 COG4Q9H9E3 785 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 GTF2H1P32780 548 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 FNTAP49354 379 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 ZNF543Q08ER8 600 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 PDK1Q15118 436 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 FAM9CQ8IZT9 166 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 SCFD2Q8WU76 684 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 ERGIC2Q96RQ1 377 aa13.21□□□□□ -0.3
LMCD1-201ENST00000157600 C16orf86Q6ZW13 317 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 ANLNQ9NQW6 1124 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 UCHL3P15374 230 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 CCNJLQ8IV13 435 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 CHAMP1Q96JM3 812 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 ZC4H2Q9NQZ6 224 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 HSPBP1Q9NZL4 362 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 IQCA1LA6NCM1 817 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 ENTPD3O75355 529 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 CCND1P24385 295 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 PCYT1AP49585 367 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 EPHA10Q5JZY3 1008 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 IRAK4Q9NWZ3 460 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 GPSM2P81274 684 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 MOXD1Q6UVY6 613 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 MFN1Q8IWA4 741 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 CNPY3Q9BT09 278 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 SFI1A8K8P3 1242 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 MTA1Q13330 715 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 SNRNP35Q16560 246 aaKnown RBP13.2□□□□□ -0.3
LMCD1-201ENST00000157600 FASTKD1Q53R41 847 aaKnown RBP13.2□□□□□ -0.3
LMCD1-201ENST00000157600 SWSAP1Q6NVH7 229 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 SLC26A7Q8TE54 656 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 PCSK1P29120 753 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 COG2Q14746 738 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 IGDCC4Q8TDY8 1250 aa13.2□□□□□ -0.3
LMCD1-201ENST00000157600 RBM15Q96T37 977 aaKnown RBP eCLIP13.2□□□□□ -0.3
LMCD1-201ENST00000157600 HEMGNQ9BXL5 484 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms