RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TMED2Q15363 201 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 C1orf220Q5T0J3 134 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 PRUNE1Q86TP1 453 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 SP8Q8IXZ3 490 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 FAM71AQ8IYT1 594 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 SEMA4DQ92854 862 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 ACCSQ96QU6 501 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 ETNK1Q9HBU6 452 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 RXFP1Q9HBX9 757 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 NINJ2Q9NZG7 142 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 NAALADL1Q9UQQ1 740 aa11.21□□□□□ -0.61
CX3CL1-201ENST00000006053 SPAG7O75391 227 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 GAS8O95995 478 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 CYP1A2P05177 515 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 ECE1P42892 770 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 MFAP3P55082 362 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 LLGL2Q6P1M3 1020 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 ARHGEF18Q6ZSZ5 1173 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 PSPC1Q8WXF1 523 aaKnown RBP11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 GMCL1Q96IK5 515 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 ZNF570Q96NI8 536 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 HERPUD2Q9BSE4 406 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 PITPNM3Q9BZ71 974 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 TMEM206Q9H813 350 aa11.21□□□□□ -0.62
CX3CL1-201ENST00000006053 IPO5O00410 1097 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 FSCN2O14926 492 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 MTA2O94776 668 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 GJB6O95452 261 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 PYGLP06737 847 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 EN1Q05925 392 aaPredicted RBP11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 MGAT5Q09328 741 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 ZYXQ15942 572 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 MIER3Q7Z3K6 550 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 CBWD2Q8IUF1 395 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 KCTD17Q8N5Z5 321 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 C12orf50Q8NA57 414 aaPredicted RBP11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 GMCL1P1Q8NEA9 526 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 VTI1AQ96AJ9 217 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 MRRFQ96E11 262 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 WDR11Q9BZH6 1224 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 PICK1Q9NRD5 415 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 UVRAGQ9P2Y5 699 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 R3HDM2Q9Y2K5 976 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 NRAPQ86VF7 1730 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 TMEM150BA6NC51 233 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 RASA4BC9J798 803 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 SLC16A4O15374 487 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 RASA4O43374 803 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 ADRB2P07550 413 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 HOXA10P31260 410 aaPredicted RBP11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 STAT2P52630 851 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 SLC8A3P57103 927 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 TCEAL1Q15170 157 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 CGB2Q6NT52 195 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 RHBDF2Q6PJF5 856 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 BZW1Q7L1Q6 419 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 VSIG1Q86XK7 387 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 FAM84AQ96KN4 292 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 ADAM33Q9BZ11 813 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 ARHGEF3Q9NR81 526 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 TOPORSQ9NS56 1045 aaPredicted RBP11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 C10orf71Q711Q0 1435 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 PIK3CDO00329 1044 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 O00370 1275 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 ALADP13716 330 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 ZNF568Q3ZCX4 644 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 HP1BP3Q5SSJ5 553 aaPredicted RBP11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 THEMIS2Q5TEJ8 643 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 CAPN12Q6ZSI9 719 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 ZNF365Q70YC5 407 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 ECHDC2Q86YB7 292 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 SLC17A8Q8NDX2 589 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 FBF1Q8TES7 1133 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 FAM167BQ9BTA0 163 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 GPRC5CQ9NQ84 441 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 KCND2Q9NZV8 630 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 ADAM22Q9P0K1 906 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 FOCADQ5VW36 1801 aa11.2□□□□□ -0.62
CX3CL1-201ENST00000006053 P4HA2O15460 535 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 IVDP26440 423 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 FOXN2P32314 431 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 PEX3P56589 373 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 CDR2Q01850 454 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 STRN3Q13033 797 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 HAUS6Q7Z4H7 955 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 MAGEB18Q96M61 343 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 CCDC77Q9BR77 488 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 TRAIPQ9BWF2 469 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 STRA6Q9BX79 667 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 PECAM1P16284 738 aaPredicted RBP11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 ATP2A2P16615 1042 aaKnown RBP11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 RRM1P23921 792 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 RXRBP28702 533 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 DNAJC3Q13217 504 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 ZFYVE27Q5T4F4 411 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 TATDN1Q6P1N9 297 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 GSTA5Q7RTV2 222 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 MAB21L3Q8N8X9 362 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 CPA5Q8WXQ8 436 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms