RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Fam126bQ8C729 530 aa8.04□□□□□ -1.12
Usp40-204ENSMUST00000187758 Cog3Q8CI04 820 aa8.04□□□□□ -1.12
Usp40-204ENSMUST00000187758 Gtpbp10Q8K013 366 aa8.04□□□□□ -1.12
Usp40-204ENSMUST00000187758 Sbk1Q8QZX0 417 aa8.04□□□□□ -1.12
Usp40-204ENSMUST00000187758 Setd3Q91WC0 594 aa8.04□□□□□ -1.12
Usp40-204ENSMUST00000187758 Arfgap2Q99K28 520 aa8.04□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ctnnbl1Q9CWL8 563 aaKnown RBP8.04□□□□□ -1.12
Usp40-204ENSMUST00000187758 Chst7Q9EP78 484 aa8.04□□□□□ -1.12
Usp40-204ENSMUST00000187758 Atp6v0a1Q9Z1G4 839 aaKnown RBP8.04□□□□□ -1.12
Usp40-204ENSMUST00000187758 Gm4297D3YWB7 211 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Gm3164L7N2B9 238 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Gm3264L7N2C5 238 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Pth1rP41593 591 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Nub1P54729 614 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Zfp397Q7TNK4 527 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Slc7a14Q8BXR1 771 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Vcpip1Q8CDG3 1220 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 AclyQ91V92 1091 aaKnown RBP8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Csde1Q91W50 798 aaKnown RBP8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ergic2Q9CR89 377 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Gtf3c6Q9D8P7 227 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Gtf2h1Q9DBA9 547 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Pdk2Q9JK42 407 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Cd97Q9Z0M6 818 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Zscan4-ps3A0A1B0GRH6 506 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Zscan4-ps2A0A1C7CYU6 506 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 GlrbP48168 496 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 YwhaeP62259 255 aaKnown RBP8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ttc39dQ0VF76 604 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ccdc102aQ3TMW1 549 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Hace1Q3U0D9 909 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Skap1Q3UUV5 355 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Pacsin1Q61644 441 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Tmco3Q8BH01 678 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Klhl36Q8R124 613 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Rnf34Q99KR6 376 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 VasnQ9CZT5 673 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 MlklQ9D2Y4 472 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 4930548H24RikQ9D496 437 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Uchl3Q9JKB1 230 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Nup210lQ9D2F7 1881 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 LctF8VPT3 1931 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ttll8A4Q9F1 832 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Serpinb6bO08804 377 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Tnfrsf18O35714 228 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Nkx2-5P42582 318 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Erich4Q3UNU4 136 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ncapg2Q6DFV1 1138 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Mpp4Q6P7F1 635 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Znf354bQ9QXT9 601 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 SktA2AQ25 1946 aaKnown RBP8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Plekhg4A0A1L1SU27 1217 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Zfp266E9Q2S7 604 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Hoxc8P09025 242 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Nap1l1P28656 391 aaKnown RBP8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Cdc25cP48967 447 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Kcnq1P97414 668 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Sorbs1Q62417 1290 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Agap1Q8BXK8 857 aaKnown RBP8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Uap1Q91YN5 522 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Fam76aQ922G2 307 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Cfap57Q9D180 1249 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 Ubxn11Q9D572 484 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 GraspQ9JJA9 392 aa8.03□□□□□ -1.12
Usp40-204ENSMUST00000187758 ZfxP17012 799 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Mgat1P27808 447 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tulp2P46686 562 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Palb2Q3U0P1 1104 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Frmd5Q6P5H6 517 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Kcnt1Q6ZPR4 1224 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Snd1Q78PY7 910 aaKnown RBP8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Polr2bQ8CFI7 1174 aaKnown RBP8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gadd45gQ9Z111 159 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 1700017N19RikA0A087WPJ1 469 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 E030030I06RikJ3QML9 246 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tnnc1P19123 161 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Oaz1P54369 227 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Grm2Q14BI2 872 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Uri1Q3TLD5 531 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 CybbQ61093 570 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Cct6bQ61390 531 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 RetsatQ64FW2 609 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Klhl17Q6TDP3 640 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Rftn2Q8CHX7 500 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Asb11Q9CQ31 323 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Rab11fip1Q9D620 645 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ptpn3A2ALK8 913 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm3252E9PUT9 216 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm3127E9Q9P5 263 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm3468E9QAJ8 216 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 2610008E11RikG3X964 669 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 4933406M09RikG3XA12 479 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm3453K7N724 263 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Xirp1O70373 1129 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Serpinh1P19324 417 aaKnown RBP8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gfpt1P47856 697 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Cyp2c38P56655 490 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Cracr2aQ3UP38 310 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Fam92bQ3V2J0 292 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Nxf2Q4ZGD8 691 aa8.02□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms