RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 APBB1IPQ7Z5R6 666 aaPredicted RBP23.81■■□□□ 1.4
SCN1B-206ENST00000638536 RBM23Q86U06 439 aaKnown RBP23.81■■□□□ 1.4
SCN1B-206ENST00000638536 SLC17A8Q8NDX2 589 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 AUTS2Q8WXX7 1259 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 SNX27Q96L92 541 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 ACAP3Q96P50 834 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 PPP1R10Q96QC0 940 aaKnown RBP23.81■■□□□ 1.4
SCN1B-206ENST00000638536 TCF25Q9BQ70 676 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 MUC3AQ02505 3323 aa23.8■■□□□ 1.4
SCN1B-206ENST00000638536 A0A0B4J269 797 aa23.8■■□□□ 1.4
SCN1B-206ENST00000638536 SMIM28A0A1B0GU29 152 aa23.8■■□□□ 1.4
SCN1B-206ENST00000638536 CASTOR2A6NHX0 329 aa23.8■■□□□ 1.4
SCN1B-206ENST00000638536 KLRC4O43908 158 aa23.8■■□□□ 1.4
SCN1B-206ENST00000638536 THP07101 528 aa23.8■■□□□ 1.4
SCN1B-206ENST00000638536 ADSSP30520 456 aa23.8■■□□□ 1.4
SCN1B-206ENST00000638536 L1TD1Q5T7N2 865 aaKnown RBP23.8■■□□□ 1.4
SCN1B-206ENST00000638536 UNC13DQ70J99 1090 aa23.8■■□□□ 1.4
SCN1B-206ENST00000638536 TAS1R1Q7RTX1 841 aa23.8■■□□□ 1.4
SCN1B-206ENST00000638536 GOLGA2P5Q9HBQ8 144 aa23.8■■□□□ 1.4
SCN1B-206ENST00000638536 PUF60Q9UHX1 559 aaKnown RBP23.8■■□□□ 1.4
SCN1B-206ENST00000638536 PER2O15055 1255 aa23.79■■□□□ 1.4
SCN1B-206ENST00000638536 PRR29P0C7W0 189 aa23.79■■□□□ 1.4
SCN1B-206ENST00000638536 CXCL8P10145 99 aa23.79■■□□□ 1.4
SCN1B-206ENST00000638536 HOXD13P35453 343 aa23.79■■□□□ 1.4
SCN1B-206ENST00000638536 SOX4Q06945 474 aaPredicted RBP23.79■■□□□ 1.4
SCN1B-206ENST00000638536 DDX53Q86TM3 631 aaKnown RBP23.79■■□□□ 1.4
SCN1B-206ENST00000638536 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.79■■□□□ 1.4
SCN1B-206ENST00000638536 VPS52Q8N1B4 723 aa23.79■■□□□ 1.4
SCN1B-206ENST00000638536 ZSWIM2Q8NEG5 633 aa23.79■■□□□ 1.4
SCN1B-206ENST00000638536 PYM1Q9BRP8 204 aaKnown RBP23.79■■□□□ 1.4
SCN1B-206ENST00000638536 IGFLR1Q9H665 355 aa23.79■■□□□ 1.4
SCN1B-206ENST00000638536 STYXL1Q9Y6J8 313 aa23.79■■□□□ 1.4
SCN1B-206ENST00000638536 TCF20Q9UGU0 1960 aaKnown RBP23.79■■□□□ 1.4
SCN1B-206ENST00000638536 LINC01565O15544 149 aa23.78■■□□□ 1.4
SCN1B-206ENST00000638536 YARSP54577 528 aaKnown RBP23.78■■□□□ 1.4
SCN1B-206ENST00000638536 SPAG1Q07617 926 aa23.78■■□□□ 1.4
SCN1B-206ENST00000638536 TUSC3Q13454 348 aa23.78■■□□□ 1.4
SCN1B-206ENST00000638536 TMC7Q7Z402 723 aa23.78■■□□□ 1.4
SCN1B-206ENST00000638536 HVCN1Q96D96 273 aa23.78■■□□□ 1.4
SCN1B-206ENST00000638536 ENTPD7Q9NQZ7 604 aa23.78■■□□□ 1.4
SCN1B-206ENST00000638536 ZNF202O95125 648 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 EFEMP2O95967 443 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 NRIP1P48552 1158 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 RBM10P98175 930 aaKnown RBP23.77■■□□□ 1.4
SCN1B-206ENST00000638536 HASPINQ8TF76 798 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 ACCSQ96QU6 501 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 MSTO1Q9BUK6 570 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 ZBP1Q9H171 429 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 CHMP5Q9NZZ3 219 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 PCDHB13Q9Y5F0 798 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 VWA8A3KMH1 1905 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 OGTO15294 1046 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 ABCD1P33897 745 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 ENOX2Q16206 610 aaKnown RBP23.77■■□□□ 1.4
SCN1B-206ENST00000638536 FAM26FQ5R3K3 315 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 KRBA2Q6ZNG9 492 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 EPM2AIP1Q7L775 607 aaPredicted RBP23.77■■□□□ 1.4
SCN1B-206ENST00000638536 TOPORSQ9NS56 1045 aaPredicted RBP23.77■■□□□ 1.4
SCN1B-206ENST00000638536 CNTN3Q9P232 1028 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 USP25Q9UHP3 1055 aa23.77■■□□□ 1.4
SCN1B-206ENST00000638536 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.76■■□□□ 1.39
SCN1B-206ENST00000638536 CLTAP09496 248 aa23.76■■□□□ 1.39
SCN1B-206ENST00000638536 ACOT2P49753 483 aa23.76■■□□□ 1.39
SCN1B-206ENST00000638536 DLX2Q07687 328 aaPredicted RBP23.76■■□□□ 1.39
SCN1B-206ENST00000638536 COL19A1Q14993 1142 aa23.76■■□□□ 1.39
SCN1B-206ENST00000638536 HLA-CQ95604 372 aa23.76■■□□□ 1.39
SCN1B-206ENST00000638536 C18orf25Q96B23 403 aaPredicted RBP23.76■■□□□ 1.39
SCN1B-206ENST00000638536 B3GALT6Q96L58 329 aa23.76■■□□□ 1.39
SCN1B-206ENST00000638536 GPR62Q9BZJ7 368 aa23.76■■□□□ 1.39
SCN1B-206ENST00000638536 SLC39A2Q9NP94 309 aa23.76■■□□□ 1.39
SCN1B-206ENST00000638536 THEGQ9P2T0 379 aa23.76■■□□□ 1.39
SCN1B-206ENST00000638536 PVALEFA0A1B0GWK0 134 aa23.75■■□□□ 1.39
SCN1B-206ENST00000638536 TTC26A0AVF1 554 aa23.75■■□□□ 1.39
SCN1B-206ENST00000638536 C2orf71A6NGG8 1288 aa23.75■■□□□ 1.39
SCN1B-206ENST00000638536 GADD45BO75293 160 aaPredicted RBP23.75■■□□□ 1.39
SCN1B-206ENST00000638536 KIF4AO95239 1232 aa23.75■■□□□ 1.39
SCN1B-206ENST00000638536 KCNE1P15382 129 aa23.75■■□□□ 1.39
SCN1B-206ENST00000638536 LTBRP36941 435 aa23.75■■□□□ 1.39
SCN1B-206ENST00000638536 CLCNKBP51801 687 aa23.75■■□□□ 1.39
SCN1B-206ENST00000638536 SNW1Q13573 536 aaKnown RBP23.75■■□□□ 1.39
SCN1B-206ENST00000638536 CRELD2Q6UXH1 353 aaPredicted RBP23.75■■□□□ 1.39
SCN1B-206ENST00000638536 RNF168Q8IYW5 571 aaPredicted RBP23.75■■□□□ 1.39
SCN1B-206ENST00000638536 FMR1NBQ8N0W7 255 aaPredicted RBP23.75■■□□□ 1.39
SCN1B-206ENST00000638536 MRPL43Q8N983 215 aaKnown RBP23.75■■□□□ 1.39
SCN1B-206ENST00000638536 ENGASEQ8NFI3 743 aa23.75■■□□□ 1.39
SCN1B-206ENST00000638536 UBE2ZQ9H832 354 aaPredicted RBP23.75■■□□□ 1.39
SCN1B-206ENST00000638536 CPSF3Q9UKF6 684 aaKnown RBP23.75■■□□□ 1.39
SCN1B-206ENST00000638536 AGO2Q9UKV8 859 aaKnown RBP23.75■■□□□ 1.39
SCN1B-206ENST00000638536 TTC28Q96AY4 2481 aa23.75■■□□□ 1.39
SCN1B-206ENST00000638536 LACTBL1A8MY62 500 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 CXCL14O95715 111 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 CTSAP10619 480 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 HSP90AA2PQ14568 343 aaPredicted RBP23.74■■□□□ 1.39
SCN1B-206ENST00000638536 CTC1Q2NKJ3 1217 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 KMT5BQ4FZB7 885 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 CD300LGQ6UXG3 332 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 SYCP3Q8IZU3 236 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 VN1R2Q8NFZ6 395 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 ZNF507Q8TCN5 953 aa23.74■■□□□ 1.39
SCN1B-206ENST00000638536 SCFD1Q8WVM8 642 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms