RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 POU5F1Q01860 360 aaKnown RBP16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 TUSC3Q13454 348 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 BMT2Q1RMZ1 405 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 TIGD5Q53EQ6 642 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 PDE12Q6L8Q7 609 aaKnown RBP16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 ELOA2Q8IYF1 753 aaPredicted RBP16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 GLIS3Q8NEA6 775 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 MAFAQ8NHW3 353 aaPredicted RBP16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 POF1BQ8WVV4 589 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 POMGNT1Q8WZA1 660 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 TMEM169Q96HH4 297 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 IGSF21Q96ID5 467 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 PPP1R10Q96QC0 940 aaKnown RBP16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 TSPAN18Q96SJ8 248 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 TLR9Q9NR96 1032 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 SLC38A7Q9NVC3 462 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 AGO2Q9UKV8 859 aaKnown RBP16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 FAN1Q9Y2M0 1017 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 PDCD11Q14690 1871 aaKnown RBP16.08■□□□□ 0.17
CDC42BPB-209ENST00000634889 SMIM28A0A1B0GU29 152 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 TISP43B9A030 160 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 NRP1O14786 923 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 KIAA0391O15091 583 aaKnown RBP16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 RHOBTB3O94955 611 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 DNAJB1P25685 340 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 ADSSP30520 456 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 SNRPFP62306 86 aaKnown RBP16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 CAMK1Q14012 370 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 KCNB1Q14721 858 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 NAB2Q15742 525 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 SLC10A6Q3KNW5 377 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 SCFD1Q8WVM8 642 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 SLC39A2Q9NP94 309 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 CPSF3Q9UKF6 684 aaKnown RBP16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 MYO9BQ13459 2157 aa16.08■□□□□ 0.16
CDC42BPB-209ENST00000634889 TTC26A0AVF1 554 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 NT5C1B-RDH14C9J2C7 533 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 KINO60870 393 aaKnown RBP16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 GADD45BO75293 160 aaPredicted RBP16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 ADRB2P07550 413 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 CXCL8P10145 99 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 TNFSF9P41273 254 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 OR1G1P47890 313 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 PPP2R3AQ06190 1150 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 SEZ6Q53EL9 994 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 DDX53Q86TM3 631 aaKnown RBP16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 TMEM173Q86WV6 379 aaPredicted RBP16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 CD302Q8IX05 232 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 KIAA0895Q8NCT3 520 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 UROC1Q96N76 676 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 COLEC11Q9BWP8 271 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 CXCL16Q9H2A7 254 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 IKZF4Q9H2S9 585 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 NSUN3Q9H649 340 aaKnown RBP16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 RPF1Q9H9Y2 349 aaKnown RBP16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 CGNQ9P2M7 1197 aaKnown RBP16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 TRIP11Q15643 1979 aa16.07■□□□□ 0.16
CDC42BPB-209ENST00000634889 MEFVO15553 781 aaPredicted RBP16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 LDHAP00338 332 aaKnown RBP16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 HOXD13P35453 343 aa16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 STK4Q13043 487 aa16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 ENOX2Q16206 610 aaKnown RBP16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 KNOP1Q1ED39 458 aaKnown RBP16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 GLRA4Q5JXX5 417 aa16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 ZBTB41Q5SVQ8 909 aa16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 ARMCX5Q6P1M9 558 aa16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 BCL7CQ8WUZ0 217 aaPredicted RBP16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 ZMAT2Q96NC0 199 aaKnown RBP16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 GBP4Q96PP9 640 aa16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 GSDMAQ96QA5 445 aa16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 RMND1Q9NWS8 449 aa16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 MARCH5Q9NX47 278 aa16.06■□□□□ 0.16
CDC42BPB-209ENST00000634889 FSCN2O14926 492 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 PRPF40AO75400 957 aaKnown RBP16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 KIF20AO95235 890 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 SMC2O95347 1197 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 ACOT2P49753 483 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 PNOCQ13519 176 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 HSP90AA2PQ14568 343 aaPredicted RBP16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 BMS1Q14692 1282 aaKnown RBP16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 HS2ST1Q7LGA3 356 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 MICALL1Q8N3F8 863 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 SPATA20Q8TB22 786 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 GOLGA5Q8TBA6 731 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 PPP2R3CQ969Q6 453 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 TCF25Q9BQ70 676 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 CBWD1Q9BRT8 395 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 ASB7Q9H672 318 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 NGRNQ9NPE2 291 aaKnown RBP16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 AGPAT3Q9NRZ7 376 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 ADAM28Q9UKQ2 775 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 PRG3Q9Y2Y8 225 aaPredicted RBP16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 DERAQ9Y315 318 aa16.05■□□□□ 0.16
CDC42BPB-209ENST00000634889 PRUNE2Q8WUY3 3088 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 ANK1P16157 1881 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 CASTOR2A6NHX0 329 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 TMEM189-UBE2V1I3L0A0 370 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 TGFB1I1O43294 461 aa16.04■□□□□ 0.16
CDC42BPB-209ENST00000634889 XPOTO43592 962 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms