RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ITGB1P05556 798 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 ADRB2P07550 413 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 LAG3P18627 525 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 GARTP22102 1010 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 ACOT2P49753 483 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 BCAR1P56945 870 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 GRIK3Q13003 919 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 CAMK1Q14012 370 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 ENOX2Q16206 610 aaKnown RBP15.61■□□□□ 0.09
CBWD3-217ENST00000621474 KNOP1Q1ED39 458 aaKnown RBP15.61■□□□□ 0.09
CBWD3-217ENST00000621474 SMYD4Q8IYR2 804 aaPredicted RBP15.61■□□□□ 0.09
CBWD3-217ENST00000621474 BCL7CQ8WUZ0 217 aaPredicted RBP15.61■□□□□ 0.09
CBWD3-217ENST00000621474 P2RX5Q93086 422 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 PPP1R10Q96QC0 940 aaKnown RBP15.61■□□□□ 0.09
CBWD3-217ENST00000621474 PAAF1Q9BRP4 392 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 AGPAT3Q9NRZ7 376 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 SMIM28A0A1B0GU29 152 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 F8W810 466 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 RB1P06400 928 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 GALTP07902 379 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 CLTAP09496 248 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 BMP6P22004 513 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 DNAJB1P25685 340 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 SLC11A1P49279 550 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 WNT7BP56706 349 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 RNASELQ05823 741 aaKnown RBP15.61■□□□□ 0.09
CBWD3-217ENST00000621474 SPOUT1Q5T280 376 aaKnown RBP15.61■□□□□ 0.09
CBWD3-217ENST00000621474 SLC39A11Q8N1S5 342 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 TMEM130Q8N3G9 435 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 MYLIPQ8WY64 445 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 SAAL1Q96ER3 474 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 RPS6KC1Q96S38 1066 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 ALG13Q9NP73 1137 aaKnown RBP15.61■□□□□ 0.09
CBWD3-217ENST00000621474 TOPORSQ9NS56 1045 aaPredicted RBP15.61■□□□□ 0.09
CBWD3-217ENST00000621474 MAPK8IP1Q9UQF2 711 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 GRM6O15303 877 aa15.6■□□□□ 0.09
CBWD3-217ENST00000621474 THP07101 528 aa15.6■□□□□ 0.09
CBWD3-217ENST00000621474 KCNE1P15382 129 aa15.6■□□□□ 0.09
CBWD3-217ENST00000621474 YARSP54577 528 aaKnown RBP15.6■□□□□ 0.09
CBWD3-217ENST00000621474 SOX4Q06945 474 aaPredicted RBP15.6■□□□□ 0.09
CBWD3-217ENST00000621474 CAMK4Q16566 473 aa15.6■□□□□ 0.09
CBWD3-217ENST00000621474 ARMCX5Q6P1M9 558 aa15.6■□□□□ 0.09
CBWD3-217ENST00000621474 SMARCE1Q969G3 411 aa15.6■□□□□ 0.09
CBWD3-217ENST00000621474 ZNF558Q96NG5 402 aa15.6■□□□□ 0.09
CBWD3-217ENST00000621474 C11orf84Q9BUA3 381 aaPredicted RBP15.6■□□□□ 0.09
CBWD3-217ENST00000621474 PCIF1Q9H4Z3 704 aa15.6■□□□□ 0.09
CBWD3-217ENST00000621474 MAN1B1Q9UKM7 699 aa15.6■□□□□ 0.09
CBWD3-217ENST00000621474 VWA8A3KMH1 1905 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 NRP1O14786 923 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 FGF18O76093 207 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 IGFBP6P24592 240 aaPredicted RBP15.59■□□□□ 0.09
CBWD3-217ENST00000621474 GPM6BQ13491 265 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 C12orf56Q8IXR9 622 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 GUF1Q8N442 669 aaKnown RBP15.59■□□□□ 0.09
CBWD3-217ENST00000621474 SPPL3Q8TCT6 385 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 FBXL18Q96ME1 805 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 GOLGA2P5Q9HBQ8 144 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 AAASQ9NRG9 546 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 MARCH5Q9NX47 278 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 HSPBP1Q9NZL4 362 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 HOOK1Q9UJC3 728 aaKnown RBP15.59■□□□□ 0.09
CBWD3-217ENST00000621474 PCDHB12Q9Y5F1 795 aa15.59■□□□□ 0.09
CBWD3-217ENST00000621474 GOLGA8IPA6NC78 632 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 GOLGA8JA6NMD2 632 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 LACTBL1A8MY62 500 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 CLIC2O15247 247 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 SMC2O95347 1197 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 EFEMP2O95967 443 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 POU3F3P20264 500 aaPredicted RBP15.58■□□□□ 0.09
CBWD3-217ENST00000621474 ALDH7A1P49419 539 aaKnown RBP15.58■□□□□ 0.09
CBWD3-217ENST00000621474 PLCB3Q01970 1234 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 SPAG1Q07617 926 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 TUSC3Q13454 348 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 ZBTB6Q15916 424 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 KYAT1Q16773 422 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 COBLL1Q53SF7 1204 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 ZNF658Q5TYW1 1059 aaPredicted RBP15.58■□□□□ 0.09
CBWD3-217ENST00000621474 TMEM174Q8WUU8 243 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 RABGGTAQ92696 567 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 CCDC47Q96A33 483 aaKnown RBP15.58■□□□□ 0.09
CBWD3-217ENST00000621474 IGSF21Q96ID5 467 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 FAM213AQ9BRX8 229 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 TMEM175Q9BSA9 504 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 VN1R3Q9BXE9 311 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 CLSTN2Q9H4D0 955 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 PLEKHA5Q9HAU0 1116 aa15.58■□□□□ 0.09
CBWD3-217ENST00000621474 CASTOR2A6NHX0 329 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 PRCPP42785 496 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 SNRPFP62306 86 aaKnown RBP15.57■□□□□ 0.08
CBWD3-217ENST00000621474 POU5F1Q01860 360 aaKnown RBP15.57■□□□□ 0.08
CBWD3-217ENST00000621474 MORC3Q14149 939 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 ZCWPW2Q504Y3 356 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 ISM2Q6H9L7 571 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 GPD1LQ8N335 351 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 C18orf25Q96B23 403 aaPredicted RBP15.57■□□□□ 0.08
CBWD3-217ENST00000621474 FAM193BQ96PV7 902 aaPredicted RBP15.57■□□□□ 0.08
CBWD3-217ENST00000621474 RPF1Q9H9Y2 349 aaKnown RBP15.57■□□□□ 0.08
CBWD3-217ENST00000621474 RMND1Q9NWS8 449 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 KIAA1468Q9P260 1216 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 TRAF3IP3Q9Y228 551 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms