RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 SLC39A2Q9NP94 309 aa19.95■□□□□ 0.78
LITAF-220ENST00000620789 FAN1Q9Y2M0 1017 aa19.95■□□□□ 0.78
LITAF-220ENST00000620789 UBE4BO95155 1302 aa19.95■□□□□ 0.78
LITAF-220ENST00000620789 REV3LO60673 3130 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 NRP1O14786 923 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 MEFVO15553 781 aaPredicted RBP19.94■□□□□ 0.78
LITAF-220ENST00000620789 NR1I2O75469 434 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 ADSSP30520 456 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 TNFSF9P41273 254 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 OR1G1P47890 313 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 PSMD2Q13200 908 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 TUSC3Q13454 348 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 POSTNQ15063 836 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 SLC10A6Q3KNW5 377 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 TIGD5Q53EQ6 642 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 GLRA4Q5JXX5 417 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 CLEC17AQ6ZS10 378 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 BCL7CQ8WUZ0 217 aaPredicted RBP19.94■□□□□ 0.78
LITAF-220ENST00000620789 POMGNT1Q8WZA1 660 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 TIGD1Q96MW7 591 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 PPP1R10Q96QC0 940 aaKnown RBP19.94■□□□□ 0.78
LITAF-220ENST00000620789 CNTN3Q9P232 1028 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 PUF60Q9UHX1 559 aaKnown RBP19.94■□□□□ 0.78
LITAF-220ENST00000620789 AGO2Q9UKV8 859 aaKnown RBP19.94■□□□□ 0.78
LITAF-220ENST00000620789 ATG2AQ2TAZ0 1938 aa19.94■□□□□ 0.78
LITAF-220ENST00000620789 CITO14578 2027 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 SMIM28A0A1B0GU29 152 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 CXCL8P10145 99 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 KCNE1P15382 129 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 HOXD13P35453 343 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 UBE2HP62256 183 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 STK4Q13043 487 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 CCDC85BQ15834 202 aaPredicted RBP19.93■□□□□ 0.78
LITAF-220ENST00000620789 BMT2Q1RMZ1 405 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 ZBTB41Q5SVQ8 909 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 SCFD1Q8WVM8 642 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 CCDC47Q96A33 483 aaKnown RBP19.93■□□□□ 0.78
LITAF-220ENST00000620789 PLEKHA5Q9HAU0 1116 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 TLR9Q9NR96 1032 aa19.93■□□□□ 0.78
LITAF-220ENST00000620789 CPSF3Q9UKF6 684 aaKnown RBP19.93■□□□□ 0.78
LITAF-220ENST00000620789 PRG3Q9Y2Y8 225 aaPredicted RBP19.93■□□□□ 0.78
LITAF-220ENST00000620789 TRIP11Q15643 1979 aa19.92■□□□□ 0.78
LITAF-220ENST00000620789 TTC26A0AVF1 554 aa19.92■□□□□ 0.78
LITAF-220ENST00000620789 RHOBTB3O94955 611 aa19.92■□□□□ 0.78
LITAF-220ENST00000620789 CSPG5O95196 566 aa19.92■□□□□ 0.78
LITAF-220ENST00000620789 GARTP22102 1010 aa19.92■□□□□ 0.78
LITAF-220ENST00000620789 ENOX2Q16206 610 aaKnown RBP19.92■□□□□ 0.78
LITAF-220ENST00000620789 KIAA0895Q8NCT3 520 aa19.92■□□□□ 0.78
LITAF-220ENST00000620789 PPM1EQ8WY54 764 aa19.92■□□□□ 0.78
LITAF-220ENST00000620789 ZMAT2Q96NC0 199 aaKnown RBP19.92■□□□□ 0.78
LITAF-220ENST00000620789 NSUN3Q9H649 340 aaKnown RBP19.92■□□□□ 0.78
LITAF-220ENST00000620789 RPF1Q9H9Y2 349 aaKnown RBP19.92■□□□□ 0.78
LITAF-220ENST00000620789 MARCH5Q9NX47 278 aa19.92■□□□□ 0.78
LITAF-220ENST00000620789 CASTOR2A6NHX0 329 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 KINO60870 393 aaKnown RBP19.91■□□□□ 0.78
LITAF-220ENST00000620789 PRPF40AO75400 957 aaKnown RBP19.91■□□□□ 0.78
LITAF-220ENST00000620789 IRS1P35568 1242 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 ACOT2P49753 483 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 ERVFC1P60507 584 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 PPP2R3AQ06190 1150 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 PNOCQ13519 176 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 KCNB1Q14721 858 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 DDX53Q86TM3 631 aaKnown RBP19.91■□□□□ 0.78
LITAF-220ENST00000620789 NELFCDQ8IXH7 590 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 COLEC11Q9BWP8 271 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 SLC38A7Q9NVC3 462 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 STK39Q9UEW8 545 aa19.91■□□□□ 0.78
LITAF-220ENST00000620789 PDCD11Q14690 1871 aaKnown RBP19.9■□□□□ 0.78
LITAF-220ENST00000620789 F8W810 466 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 FSCN2O14926 492 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 TGFB1I1O43294 461 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 ADRB2P07550 413 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 POU5F1Q01860 360 aaKnown RBP19.9■□□□□ 0.78
LITAF-220ENST00000620789 HSP90AA2PQ14568 343 aaPredicted RBP19.9■□□□□ 0.78
LITAF-220ENST00000620789 PDE12Q6L8Q7 609 aaKnown RBP19.9■□□□□ 0.78
LITAF-220ENST00000620789 ARMCX5Q6P1M9 558 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 ELOA2Q8IYF1 753 aaPredicted RBP19.9■□□□□ 0.78
LITAF-220ENST00000620789 MICAL1Q8TDZ2 1067 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 UROC1Q96N76 676 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 TCF25Q9BQ70 676 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 PAAF1Q9BRP4 392 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 CBWD1Q9BRT8 395 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 VN1R3Q9BXE9 311 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 CACNG4Q9UBN1 327 aa19.9■□□□□ 0.78
LITAF-220ENST00000620789 HOOK1Q9UJC3 728 aaKnown RBP19.9■□□□□ 0.78
LITAF-220ENST00000620789 PRUNE2Q8WUY3 3088 aa19.89■□□□□ 0.78
LITAF-220ENST00000620789 LACTBL1A8MY62 500 aa19.89■□□□□ 0.77
LITAF-220ENST00000620789 KIAA0391O15091 583 aaKnown RBP19.89■□□□□ 0.77
LITAF-220ENST00000620789 LDHAP00338 332 aaKnown RBP19.89■□□□□ 0.77
LITAF-220ENST00000620789 SNRPFP62306 86 aaKnown RBP19.89■□□□□ 0.77
LITAF-220ENST00000620789 SOX4Q06945 474 aaPredicted RBP19.89■□□□□ 0.77
LITAF-220ENST00000620789 KNOP1Q1ED39 458 aaKnown RBP19.89■□□□□ 0.77
LITAF-220ENST00000620789 TCEAL5Q5H9L2 206 aa19.89■□□□□ 0.77
LITAF-220ENST00000620789 CRELD2Q6UXH1 353 aaPredicted RBP19.89■□□□□ 0.77
LITAF-220ENST00000620789 TMC7Q7Z402 723 aa19.89■□□□□ 0.77
LITAF-220ENST00000620789 CD302Q8IX05 232 aa19.89■□□□□ 0.77
LITAF-220ENST00000620789 VPS52Q8N1B4 723 aa19.89■□□□□ 0.77
LITAF-220ENST00000620789 RABGGTAQ92696 567 aa19.89■□□□□ 0.77
LITAF-220ENST00000620789 SAAL1Q96ER3 474 aa19.89■□□□□ 0.77
LITAF-220ENST00000620789 PCIF1Q9H4Z3 704 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms