RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ADSSP30520 456 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 HOXD13P35453 343 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 STAT6P42226 847 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 NRIP1P48552 1158 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 CASP5P51878 434 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 DSG1Q02413 1049 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 RNASELQ05823 741 aaKnown RBP9.62□□□□□ -0.87
SSBP4-208ENST00000600628 KCNA1Q09470 495 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 DHX8Q14562 1220 aaKnown RBP9.62□□□□□ -0.87
SSBP4-208ENST00000600628 SMC1AQ14683 1233 aaKnown RBP9.62□□□□□ -0.87
SSBP4-208ENST00000600628 SMAD2Q15796 467 aaKnown RBP9.62□□□□□ -0.87
SSBP4-208ENST00000600628 UPP1Q16831 310 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 ZNF568Q3ZCX4 644 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 ZC2HC1CQ53FD0 456 aaPredicted RBP9.62□□□□□ -0.87
SSBP4-208ENST00000600628 PTCRAQ6ISU1 281 aaPredicted RBP9.62□□□□□ -0.87
SSBP4-208ENST00000600628 EPM2AIP1Q7L775 607 aaPredicted RBP9.62□□□□□ -0.87
SSBP4-208ENST00000600628 DYMQ7RTS9 669 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 TAS1R1Q7RTX1 841 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 APBB1IPQ7Z5R6 666 aaPredicted RBP9.62□□□□□ -0.87
SSBP4-208ENST00000600628 RBM23Q86U06 439 aaKnown RBP9.62□□□□□ -0.87
SSBP4-208ENST00000600628 FAM178BQ8IXR5 827 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 MYCT1Q8N699 235 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 IQUBQ8NA54 791 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 SLC22A17Q8WUG5 538 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 SUSD6Q92537 303 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 TCF25Q9BQ70 676 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 HERC2P3Q9BVR0 1158 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 FGFBP2Q9BYJ0 223 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 PANK2Q9BZ23 570 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 GPR62Q9BZJ7 368 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 S1PR5Q9H228 398 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 TLE6Q9H808 572 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 PLEKHA5Q9HAU0 1116 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 ADAM28Q9UKQ2 775 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 C2orf16Q68DN1 1984 aa9.62□□□□□ -0.87
SSBP4-208ENST00000600628 SCN1AP35498 2009 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 WDFY4Q6ZS81 3184 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 A0A1W2PQ27 194 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 A0A1W2PQ64 194 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 A0A1W2PQD8 194 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 C19orf67A6NJJ6 358 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 PER2O15055 1255 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 OGTO15294 1046 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 POLR2DO15514 142 aaKnown RBP9.61□□□□□ -0.87
SSBP4-208ENST00000600628 CLDN3O15551 220 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 SLFN14P0C7P3 912 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 IL9P15248 144 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 RBM10P98175 930 aaKnown RBP9.61□□□□□ -0.87
SSBP4-208ENST00000600628 STRN3Q13033 797 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 BECN1Q14457 450 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 HSP90AA2PQ14568 343 aaPredicted RBP9.61□□□□□ -0.87
SSBP4-208ENST00000600628 ENOX2Q16206 610 aaKnown RBP9.61□□□□□ -0.87
SSBP4-208ENST00000600628 L1TD1Q5T7N2 865 aaKnown RBP9.61□□□□□ -0.87
SSBP4-208ENST00000600628 PLPP4Q5VZY2 271 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 SYCE2Q6PIF2 218 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 CRELD2Q6UXH1 353 aaPredicted RBP9.61□□□□□ -0.87
SSBP4-208ENST00000600628 TMC7Q7Z402 723 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 PDILTQ8N807 584 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 C3orf58Q8NDZ4 430 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 TMEM174Q8WUU8 243 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 ACAP3Q96P50 834 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 TSPAN18Q96SJ8 248 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 APOL6Q9BWW8 343 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 RHOBTB2Q9BYZ6 727 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 SCAND2PQ9GZW5 306 aaPredicted RBP9.61□□□□□ -0.87
SSBP4-208ENST00000600628 GBP3Q9H0R5 595 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 IKZF4Q9H2S9 585 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 FNIP2Q9P278 1114 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 CACNG4Q9UBN1 327 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 PARP2Q9UGN5 583 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 CPSF3Q9UKF6 684 aaKnown RBP9.61□□□□□ -0.87
SSBP4-208ENST00000600628 GDAQ9Y2T3 454 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 HCFC2Q9Y5Z7 792 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 DOCK6Q96HP0 2047 aa9.61□□□□□ -0.87
SSBP4-208ENST00000600628 DOCK8Q8NF50 2099 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 TISP43B9A030 160 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 K7ENM7 598 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 HNRNPDLO14979 420 aaKnown RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 MBTPS2O43462 519 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 KLRC4O43908 158 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 TBC1D4O60343 1298 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 CLASP2O75122 1294 aaKnown RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 TBCAO75347 108 aaKnown RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 KIF4AO95239 1232 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 CXCL14O95715 111 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 CLTAP09496 248 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 CNPP09543 421 aaKnown RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 HOXB8P17481 243 aaPredicted RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 LRPAP1P30533 357 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 TNFSF9P41273 254 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 ME1P48163 572 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 AARSP49588 968 aaKnown RBP eCLIP9.6□□□□□ -0.876e-8■■■■■ 30.9
SSBP4-208ENST00000600628 NDUFV1P49821 464 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 KRT85P78386 507 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 SMAD4Q13485 552 aaKnown RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 ALCAMQ13740 583 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 KYAT1Q16773 422 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 BMT2Q1RMZ1 405 aa9.6□□□□□ -0.87
SSBP4-208ENST00000600628 FOXD4L6Q3SYB3 417 aaPredicted RBP9.6□□□□□ -0.87
SSBP4-208ENST00000600628 ZBTB41Q5SVQ8 909 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms