RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 TRANK1O15050 2925 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 GRM6O15303 877 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 B4GALT3O60512 393 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 SMC2O95347 1197 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 KCNE1P15382 129 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 ADSSP30520 456 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 SLC11A1P49279 550 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 STK4Q13043 487 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 SPPL3Q8TCT6 385 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 TMEM169Q96HH4 297 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 PPP1R10Q96QC0 940 aaKnown RBP15.06■□□□□ 0
SNRPA-208ENST00000600456 GTPBP4Q9BZE4 634 aaKnown RBP15.06■□□□□ 0
SNRPA-208ENST00000600456 CNTN3Q9P232 1028 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 CGNQ9P2M7 1197 aaKnown RBP15.06■□□□□ 0
SNRPA-208ENST00000600456 DNAJB4Q9UDY4 337 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 CPSF3Q9UKF6 684 aaKnown RBP15.06■□□□□ 0
SNRPA-208ENST00000600456 AGO2Q9UKV8 859 aaKnown RBP15.06■□□□□ 0
SNRPA-208ENST00000600456 FAN1Q9Y2M0 1017 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 COL4A4P53420 1690 aaPredicted RBP15.06■□□□□ 0
SNRPA-208ENST00000600456 NLRC5Q86WI3 1866 aa15.06■□□□□ 0
SNRPA-208ENST00000600456 SMIM28A0A1B0GU29 152 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 TISP43B9A030 160 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 NRP1O14786 923 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 KIF20AO95235 890 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 LDHAP00338 332 aaKnown RBP15.05■□□□□ -0
SNRPA-208ENST00000600456 HOXD13P35453 343 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 PBX3P40426 434 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 HSP90AA2PQ14568 343 aaPredicted RBP15.05■□□□□ -0
SNRPA-208ENST00000600456 KNOP1Q1ED39 458 aaKnown RBP15.05■□□□□ -0
SNRPA-208ENST00000600456 SLC10A6Q3KNW5 377 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 TIGD5Q53EQ6 642 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 PDE12Q6L8Q7 609 aaKnown RBP15.05■□□□□ -0
SNRPA-208ENST00000600456 HS2ST1Q7LGA3 356 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 CD302Q8IX05 232 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 KIAA0895Q8NCT3 520 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 SPATA20Q8TB22 786 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 GOLGA5Q8TBA6 731 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 POF1BQ8WVV4 589 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 IGSF21Q96ID5 467 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 UROC1Q96N76 676 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 GSDMAQ96QA5 445 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 IKZF4Q9H2S9 585 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 RPF1Q9H9Y2 349 aaKnown RBP15.05■□□□□ -0
SNRPA-208ENST00000600456 ALG13Q9NP73 1137 aaKnown RBP15.05■□□□□ -0
SNRPA-208ENST00000600456 KIAA1671Q9BY89 1806 aa15.05■□□□□ -0
SNRPA-208ENST00000600456 TTC26A0AVF1 554 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 ADRB2P07550 413 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 CXCL8P10145 99 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 OR1G1P47890 313 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 PPP2R3AQ06190 1150 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 PNOCQ13519 176 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 NAB2Q15742 525 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 ENOX2Q16206 610 aaKnown RBP15.04■□□□□ -0
SNRPA-208ENST00000600456 SEZ6Q53EL9 994 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 ZBTB41Q5SVQ8 909 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 ARMCX5Q6P1M9 558 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 SMARCE1Q969G3 411 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 COLEC11Q9BWP8 271 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 TLR9Q9NR96 1032 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 AGPAT3Q9NRZ7 376 aa15.04■□□□□ -0
SNRPA-208ENST00000600456 NT5C1B-RDH14C9J2C7 533 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 GOLGA6L22H0YM25 854 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 MEFVO15553 781 aaPredicted RBP15.03■□□□□ -0
SNRPA-208ENST00000600456 TGFB1I1O43294 461 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 EXTL3O43909 919 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 DNAJB1P25685 340 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 TNFSF9P41273 254 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 ACOT2P49753 483 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 CAMK1Q14012 370 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 GLRA4Q5JXX5 417 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 DDX53Q86TM3 631 aaKnown RBP15.03■□□□□ -0
SNRPA-208ENST00000600456 TMEM173Q86WV6 379 aaPredicted RBP15.03■□□□□ -0
SNRPA-208ENST00000600456 NELFCDQ8IXH7 590 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 C12orf56Q8IXR9 622 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 MAFAQ8NHW3 353 aaPredicted RBP15.03■□□□□ -0
SNRPA-208ENST00000600456 DDX27Q96GQ7 796 aaKnown RBP15.03■□□□□ -0
SNRPA-208ENST00000600456 ZMAT2Q96NC0 199 aaKnown RBP15.03■□□□□ -0
SNRPA-208ENST00000600456 CBWD1Q9BRT8 395 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 CXCL16Q9H2A7 254 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 ASB7Q9H672 318 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 KIAA1586Q9HCI6 787 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 DERAQ9Y315 318 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 PCDHA5Q9Y5H7 936 aa15.03■□□□□ -0
SNRPA-208ENST00000600456 XPOTO43592 962 aaKnown RBP15.02■□□□□ -0
SNRPA-208ENST00000600456 IL18RAPO95256 599 aa15.02■□□□□ -0
SNRPA-208ENST00000600456 BMS1Q14692 1282 aaKnown RBP15.02■□□□□ -0
SNRPA-208ENST00000600456 CRELD2Q6UXH1 353 aaPredicted RBP15.02■□□□□ -0
SNRPA-208ENST00000600456 GPD1LQ8N335 351 aa15.02■□□□□ -0
SNRPA-208ENST00000600456 GUF1Q8N442 669 aaKnown RBP15.02■□□□□ -0
SNRPA-208ENST00000600456 TMEM174Q8WUU8 243 aa15.02■□□□□ -0
SNRPA-208ENST00000600456 BCL7CQ8WUZ0 217 aaPredicted RBP15.02■□□□□ -0
SNRPA-208ENST00000600456 PPP2R3CQ969Q6 453 aa15.02■□□□□ -0
SNRPA-208ENST00000600456 FAM213AQ9BRX8 229 aa15.02■□□□□ -0
SNRPA-208ENST00000600456 NSUN3Q9H649 340 aaKnown RBP15.02■□□□□ -0
SNRPA-208ENST00000600456 NGRNQ9NPE2 291 aaKnown RBP15.02■□□□□ -0
SNRPA-208ENST00000600456 MARCH5Q9NX47 278 aa15.02■□□□□ -0
SNRPA-208ENST00000600456 PRG3Q9Y2Y8 225 aaPredicted RBP15.02■□□□□ -0
SNRPA-208ENST00000600456 CASTOR2A6NHX0 329 aa15.01□□□□□ -0.01
SNRPA-208ENST00000600456 LACTBL1A8MY62 500 aa15.01□□□□□ -0.01
SNRPA-208ENST00000600456 TMEM189-UBE2V1I3L0A0 370 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms