RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 GPIHBP1Q8IV16 184 aa25.27■■□□□ 1.64
SYMPK-212ENST00000598896 OR5B17Q8NGF7 314 aa25.27■■□□□ 1.64
SYMPK-212ENST00000598896 CHP1Q99653 195 aa25.27■■□□□ 1.64
SYMPK-212ENST00000598896 NAA15Q9BXJ9 866 aaKnown RBP25.27■■□□□ 1.64
SYMPK-212ENST00000598896 FBXL5Q9UKA1 691 aa25.27■■□□□ 1.64
SYMPK-212ENST00000598896 PLAGL2Q9UPG8 496 aa25.27■■□□□ 1.64
SYMPK-212ENST00000598896 NOC2LQ9Y3T9 749 aaKnown RBP25.27■■□□□ 1.64
SYMPK-212ENST00000598896 ARHGAP6O43182 974 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 C4BPAP04003 597 aaKnown RBP25.26■■□□□ 1.63
SYMPK-212ENST00000598896 HNRNPH3P31942 346 aaKnown RBP25.26■■□□□ 1.63
SYMPK-212ENST00000598896 PTK7Q13308 1070 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 ZACNQ401N2 412 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 TDRD10Q5VZ19 366 aaKnown RBP25.26■■□□□ 1.63
SYMPK-212ENST00000598896 IQCEQ6IPM2 695 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 PHLDB3Q6NSJ2 640 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 NOTUMQ6P988 496 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 FAM228AQ86W67 206 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 FAM212AQ96EL1 285 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 ADPGKQ9BRR6 497 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 EIF2AQ9BY44 585 aaKnown RBP25.26■■□□□ 1.63
SYMPK-212ENST00000598896 APEX2Q9UBZ4 518 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 B4GALT4O60513 344 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 TRIM71Q2Q1W2 868 aaKnown RBP25.26■■□□□ 1.63
SYMPK-212ENST00000598896 SLC27A1Q6PCB7 646 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 RAD9BQ6WBX8 426 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 FBXL13Q8NEE6 735 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 TRPV6Q9H1D0 765 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 OGDHLQ9ULD0 1010 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 PIN4Q9Y237 131 aaKnown RBP25.26■■□□□ 1.63
SYMPK-212ENST00000598896 NOD1Q9Y239 953 aa25.26■■□□□ 1.63
SYMPK-212ENST00000598896 NPTXRO95502 500 aa25.25■■□□□ 1.63
SYMPK-212ENST00000598896 NCBP1Q09161 790 aaKnown RBP25.25■■□□□ 1.63
SYMPK-212ENST00000598896 CTU1Q7Z7A3 348 aaKnown RBP25.25■■□□□ 1.63
SYMPK-212ENST00000598896 OSBPL7Q9BZF2 842 aa25.25■■□□□ 1.63
SYMPK-212ENST00000598896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.25■■□□□ 1.631e-6■■■■■ 177.9
SYMPK-212ENST00000598896 A0A0U1RQG5 324 aaPredicted RBP25.24■■□□□ 1.63
SYMPK-212ENST00000598896 RPLP2P05387 115 aaKnown RBP25.24■■□□□ 1.63
SYMPK-212ENST00000598896 CLTAP09496 248 aa25.24■■□□□ 1.63
SYMPK-212ENST00000598896 AXLP30530 894 aa25.24■■□□□ 1.63
SYMPK-212ENST00000598896 DCAF4L1Q3SXM0 396 aa25.24■■□□□ 1.63
SYMPK-212ENST00000598896 WDR49Q8IV35 697 aa25.24■■□□□ 1.63
SYMPK-212ENST00000598896 ARHGEF19Q8IW93 802 aa25.24■■□□□ 1.63
SYMPK-212ENST00000598896 EFCAB13Q8IY85 973 aa25.24■■□□□ 1.63
SYMPK-212ENST00000598896 ELMO3Q96BJ8 720 aa25.24■■□□□ 1.63
SYMPK-212ENST00000598896 RPF1Q9H9Y2 349 aaKnown RBP25.24■■□□□ 1.63
SYMPK-212ENST00000598896 RAB20Q9NX57 234 aa25.24■■□□□ 1.63
SYMPK-212ENST00000598896 JAM2P57087 298 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 TSR1Q2NL82 804 aaKnown RBP25.23■■□□□ 1.63
SYMPK-212ENST00000598896 SCARA3Q6AZY7 606 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 CYP26C1Q6V0L0 522 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 TMTC1Q8IUR5 882 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 VNN1O95497 513 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 KCNJ6P48051 423 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 RAPGEF1Q13905 1077 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 SLC10A6Q3KNW5 377 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 TOGARAM2Q6ZUX3 1019 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 MTMR12Q9C0I1 747 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 DNAJC12Q9UKB3 198 aa25.23■■□□□ 1.63
SYMPK-212ENST00000598896 ARVCFO00192 962 aa25.22■■□□□ 1.63
SYMPK-212ENST00000598896 PLEKP08567 350 aaPredicted RBP25.22■■□□□ 1.63
SYMPK-212ENST00000598896 GRM5P41594 1212 aa25.22■■□□□ 1.63
SYMPK-212ENST00000598896 LBX1P52954 281 aa25.22■■□□□ 1.63
SYMPK-212ENST00000598896 BIRC3Q13489 604 aa25.22■■□□□ 1.63
SYMPK-212ENST00000598896 SPAG5Q96R06 1193 aa25.22■■□□□ 1.63
SYMPK-212ENST00000598896 PI4K2AQ9BTU6 479 aa25.22■■□□□ 1.63
SYMPK-212ENST00000598896 HES2Q9Y543 173 aa25.22■■□□□ 1.63
SYMPK-212ENST00000598896 CITO14578 2027 aa25.22■■□□□ 1.63
SYMPK-212ENST00000598896 USP27XA6NNY8 438 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 LACTBL1A8MY62 500 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 PNMA6AP0CW24 399 aaPredicted RBP25.21■■□□□ 1.63
SYMPK-212ENST00000598896 SURF1Q15526 300 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 UBXN11Q5T124 520 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 FBXO46Q6PJ61 603 aaPredicted RBP25.21■■□□□ 1.63
SYMPK-212ENST00000598896 ZNF333Q96JL9 665 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 GPR88Q9GZN0 384 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 NUCKS1Q9H1E3 243 aaKnown RBP25.21■■□□□ 1.63
SYMPK-212ENST00000598896 AGO3Q9H9G7 860 aaKnown RBP25.21■■□□□ 1.63
SYMPK-212ENST00000598896 ZNHIT6Q9NWK9 470 aaKnown RBP25.21■■□□□ 1.63
SYMPK-212ENST00000598896 ARHGAP20Q9P2F6 1191 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 MROH7Q68CQ1 1323 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 ZNF500O60304 480 aaPredicted RBP25.21■■□□□ 1.63
SYMPK-212ENST00000598896 RPS6KA5O75582 802 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 HLA-DRAP01903 254 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 NFICP08651 508 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 KYAT1Q16773 422 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 SFMBT2Q5VUG0 894 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 SYN2Q92777 582 aaPredicted RBP25.21■■□□□ 1.63
SYMPK-212ENST00000598896 NXF3Q9H4D5 531 aaKnown RBP25.21■■□□□ 1.63
SYMPK-212ENST00000598896 ST3GAL5Q9UNP4 418 aa25.21■■□□□ 1.63
SYMPK-212ENST00000598896 IL18RAPO95256 599 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 CDK7P50613 346 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 CDK17Q00537 523 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 POU5F1Q01860 360 aaKnown RBP25.2■■□□□ 1.62
SYMPK-212ENST00000598896 ZNF618Q5T7W0 954 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 HGSNATQ68CP4 663 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 KAT5Q92993 513 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 ACAP3Q96P50 834 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 DESI2Q9BSY9 194 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 CXCL16Q9H2A7 254 aa25.2■■□□□ 1.62
SYMPK-212ENST00000598896 UBE2TQ9NPD8 197 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms